Ss1.1-Pig3-SRG8006G11.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGAAGCTTCTCCCTTGGAGAACAGTCTCGAGTGATGTCTCACTTCTTGCCCAATGATCT GGGCTTCATTGATACCTACTCCCAGAAGGCTTTCTGTGGCATCTACAGCAAAGATGGTCA GATCTTCATGTCTGCCTGCCAAGACCAGGTAATCCGAATGTATGACTGCCGGTATGGCCG CTTTCATAAGTTCAAGAGCATCAAGGCCCGGGATGTCGGCTGGAGCGTCTTGGATGTGGC CTTCACCCCTGATGGGAATCATTTCCTTTACTCCAGCTGGTCTGATTACATTCATATCTG CAACATCTACGGGGAGGGAGACACACACACAGCCCTGGATCTAAAGCCTGTTGAGCGTCG CTTTGCCGTCTTCTCCATCGCCGTGTCTTCAGATGGACGATAAGTGCTTGGAGGGGCCAA CGATGGCTGCCTGTATGTCTTTGATCGAGAACAGAATCGGCGTACCCTTCAGATTGAATC CCATGAGGATGATGTGAATGCAGTGGCCTTTGCTGACAGCTCCTTGATGACCTACCGGGG CCACGGGGTGCTGCACACCCTCATCCGCTGCCGGTTCTCTCCCACCTACAGCACCGGCCA ACAGTACATCTACAGTGGCTGCTCCACCGGCAAAGTGGTTGTGTACGACCTCCTCAGTGG CCACATCGTAAAGAAGCTGACCAGCCACAAGGCCTGTGTGCGTGATGTCAGCTGGCACCC CTTTGAGGAGAAGATTGTCAGCAGTTCGTGGGACGGGAACCTGCGTCTGTGGCAGTACCG CCAGGCCGAGTACTTCCAGGACGACATGCCAGAGTCCGAGGAACACCCCAGCTCCCCTGC CTCAGTGTCCCACCCCTCTACAGCTTTTCCTCCCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGAAGCTTCTCCCTTGGAGAACAGTCTCGAGTGATGTCTCACTTCTTGCCCAATGATCT GGGCTTCATTGATACCTACTCCCAGAAGGCTTTCTGTGGCATCTACAGCAAAGATGGTCA GATCTTCATGTCTGCCTGCCAAGACCAGGTAATCCGAATGTATGACTGCCGGTATGGCCG CTTTCATAAGTTCAAGAGCATCAAGGCCCGGGATGTCGGCTGGAGCGTCTTGGATGTGGC CTTCACCCCTGATGGGAATCATTTCCTTTACTCCAGCTGGTCTGATTACATTCATATCTG CAACATCTACGGGGAGGGAGACACACACACAGCCCTGGATCTAAAGCCTGTTGAGCGTCG CTTTGCCGTCTTCTCCATCGCCGTGTCTTCAGATGGACGATAAGTGCTTGGAGGGGCCAA CGATGGCTGCCTGTATGTCTTTGATCGAGAACAGAATCGGCGTACCCTTCAGATTGAATC CCATGAGGATGATGTGAATGCAGTGGCCTTTGCTGACAGCTCCTTGATGACCTACCGGGG CCACGGGGTGCTGCACACCCTCATCCGCTGCCGGTTCTCTCCCACCTACAGCACCGGCCA ACAGTACATCTACAGTGGCTGCTCCACCGGCAAAGTGGTTGTGTACGACCTCCTCAGTGG CCACATCGTAAAGAAGCTGACCAGCCACAAGGCCTGTGTGCGTGATGTCAGCTGGCACCC CTTTGAGGAGAAGATTGTCAGCAGTTCGTGGGACGGGAACCTGCGTCTGTGGCAGTACCG CCAGGCCGAGTACTTCCAGGACGACATGCCAGAGTCCGAGGAACACCCCAGCTCCCCTGC CTCAGTGTCCCACCCCTCTACAGCTTTTCCTCCCCC |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 142-290, gnl|bosTau2|chr10 (12384156-12384008) | |
| 142-290, gnl|Hg17|chr14 (23657435-23657583) | |
| 142-290, gnl|Mm7|chr14 (50431650-50431798) | |
| 515-639, gnl|bosTau2|chr10 (12381723-12381599) | |
| 515-639, gnl|canFam2|chr8 (7127991-7128168) | |
| 515-639, gnl|danRer3|chr24 (17337016-17337184) | |
| 515-639, gnl|dasNov1|scaffold_37422 (3676-3853) | |
| 515-639, gnl|echTel1|scaffold_275767 (8028-7851) | |
| 515-639, gnl|fr1|chrUn (47757059-47757225) | |
| 515-639, gnl|hg17|chr14 (23660395-23660572) | |
| 515-639, gnl|Hg17|chr14 (23660440-23660564) | |
| 515-639, gnl|mm7|chr14 (50434501-50434687) | |
| 515-639, gnl|Mm7|chr14 (50434555-50434679) | |
| 515-639, gnl|monDom2|scaffold_12 (25646563-25646386) | |
| 515-639, gnl|oryCun1|scaffold_120305 (1353-1176) | |
| 515-639, gnl|panTro1|chr15 (22560658-22560835) | |
| 515-639, gnl|rheMac2|chr7 (87014923-87015100) | |
| 515-639, gnl|rn3|chr15 (33714044-33714234) | |
| 515-639, gnl|tetNig1|chrUn_random (52817769-52817935) | |
| 515-639, gnl|xenTro1|scaffold_53 (401112-401273) | |
| 748-876, gnl|bosTau2|chr10 (12380594-12380465) | |
| 748-876, gnl|Hg17|chr14 (23662223-23662352) | |
| 748-876, gnl|Mm7|chr14 (50436508-50436646) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 142-290, gnl|bosTau2|chr10 (12384156-12384008) | |
| 142-290, gnl|Hg17|chr14 (23657435-23657583) | |
| 142-290, gnl|Mm7|chr14 (50431650-50431798) | |
| 515-639, gnl|bosTau2|chr10 (12381723-12381599) | |
| 515-639, gnl|canFam2|chr8 (7127991-7128168) | |
| 515-639, gnl|danRer3|chr24 (17337016-17337184) | |
| 515-639, gnl|dasNov1|scaffold_37422 (3676-3853) | |
| 515-639, gnl|echTel1|scaffold_275767 (8028-7851) | |
| 515-639, gnl|fr1|chrUn (47757059-47757225) | |
| 515-639, gnl|hg17|chr14 (23660395-23660572) | |
| 515-639, gnl|Hg17|chr14 (23660440-23660564) | |
| 515-639, gnl|mm7|chr14 (50434501-50434687) | |
| 515-639, gnl|Mm7|chr14 (50434555-50434679) | |
| 515-639, gnl|monDom2|scaffold_12 (25646563-25646386) | |
| 515-639, gnl|oryCun1|scaffold_120305 (1353-1176) | |
| 515-639, gnl|panTro1|chr15 (22560658-22560835) | |
| 515-639, gnl|rheMac2|chr7 (87014923-87015100) | |
| 515-639, gnl|rn3|chr15 (33714044-33714234) | |
| 515-639, gnl|tetNig1|chrUn_random (52817769-52817935) | |
| 515-639, gnl|xenTro1|scaffold_53 (401112-401273) | |
| 748-876, gnl|bosTau2|chr10 (12380594-12380465) | |
| 748-876, gnl|Hg17|chr14 (23662223-23662352) | |
| 748-876, gnl|Mm7|chr14 (50436508-50436646) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hlv (0.139256) |