Non-Coding RNA Search

Ss1.1-Pig3-SRG8006H04.5

Sequence:


               
               TCTAGACTCAGCTAAAACGTCTAATCAACCACACTGCACCTTAAGTGTAGAAATTTCACC
CGGACTTTTAGCAGATGAGAAGGGTGCACTCAACCAGACTTCTGAGCAAACGGAGTCCTT
GTCATCCAGCTTCATACTGGTTAAAGATTTGGGTCAGGGCACACAGAATCCAGTGACAAA
CAGGCCTGAGACCAGAGAAAATGTCTGTCCTGAAGCTGCAGGGCTACGTCAAGAATTTGA
ACCACCTACCAGCCATCCATCATCAAGTCCTTCCTTTCTTGCACCGTTAATTTTTCCTGC
TGCAGACATTGACCGGATTCTTCGGGCCGGCTTTACCTTGCAGGAAGCTCTTGGGGCTTT
GCATCGAGTTGGTGGAAATGCAGACCTTGCACTTCTTGTTTTGCTAGCAAAGAACATTGT
AGTTCCTACATAACCATGGAAAAGGGGTCTAGACCATACTCCATTCCCTTAAGAGAAAGC
TCTATATATTCACACACACACACACACATGCACACGTACACACTCACCACATAGACAGTG
TATGTAGAAACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTAGACTCAGCTAAAACGTCTAATCAACCACACTGCACCTTAAGTGTAGAAATTTCACC
CGGACTTTTAGCAGATGAGAAGGGTGCACTCAACCAGACTTCTGAGCAAACGGAGTCCTT
GTCATCCAGCTTCATACTGGTTAAAGATTTGGGTCAGGGCACACAGAATCCAGTGACAAA
CAGGCCTGAGACCAGAGAAAATGTCTGTCCTGAAGCTGCAGGGCTACGTCAAGAATTTGA
ACCACCTACCAGCCATCCATCATCAAGTCCTTCCTTTCTTGCACCGTTAATTTTTCCTGC
TGCAGACATTGACCGGATTCTTCGGGCCGGCTTTACCTTGCAGGAAGCTCTTGGGGCTTT
GCATCGAGTTGGTGGAAATGCAGACCTTGCACTTCTTGTTTTGCTAGCAAAGAACATTGT
AGTTCCTACATAACCATGGAAAAGGGGTCTAGACCATACTCCATTCCCTTAAGAGAAAGC
TCTATATATTCACACACACACACACACATGCACACGTACACACTCACCACATAGACAGTG
TATGTAGAAACC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               3-522, gnl|bosTau2|chr16 (38912696-38913218)
               

               
               3-522, gnl|Hg17|chr1 (15733093-15733618)
               

               
               3-522, gnl|Mm7|chr4 (141062665-141062212)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-522, gnl|bosTau2|chr16 (38912696-38913218)
               

               
               3-522, gnl|Hg17|chr1 (15733093-15733618)
               

               
               3-522, gnl|Mm7|chr4 (141062665-141062212)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               hea (0.204499)
               

               
               sin (0.174948)
               

               
               nje (0.16592)
               

               
               lin (0.145603)
               

               
               spc (0.113366)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)
               

               
               sin (0.174948)
               

               
               nje (0.16592)
               

               
               lin (0.145603)
               

               
               spc (0.113366)

	3-522, gnl\|bosTau2\|chr16 (38912696-38913218)
	3-522, gnl\|Hg17\|chr1 (15733093-15733618)
	3-522, gnl\|Mm7\|chr4 (141062665-141062212)

	hea (0.204499)
	sin (0.174948)
	nje (0.16592)
	lin (0.145603)
	spc (0.113366)