Non-Coding RNA Search

Ss1.1-Pig3-SRG8006N20.5

Sequence:


               
               GAAAGTTATCAATAATCCCAGCTACCGTCAGAGGGCTCAGAAGCTTTCAGAAATCCACAA
GGATCAACCTGGTCACCCTGTCAATCGGACTGTCTATTGGATCGATTATATTCTCCGTCA
CGATGGAGCCCATCACCTCCGTGCCGCTGTCCATCAAATCTCATTCTGTCAGTATTTTTT
ACTGGATATTGCCTTTGTGCTTCTGCTTGGTGCTGCCTTGTTTTACTTCCTCTTGTCCTG
GGTGACAAAATTTATCTACAGAAAAATCAAAAGTTTGTGGTCTAGAAATAAGCATAGCAC
AGTTAATGGACATTACCCTAATGGAATCCTCAATGGCAAGTATAAAAGAAATGGCCATAT
TAAACATGAAAAGAAGGTGAAATGAGCCAACAGCCCACCTGATAGTCACCAATCTGTTCA
GTCATTGAATTTTTATTGCTATAATTTAGGCTAACAACTACTAAAAGGAAAACATCAGTA
AATAATTCTAATACTCCCTTATCTGATCTTACTAATGAAATTCTGTGGAATTAAGATGGC
TGTAAAAAGCACAAACCTAAAATGCAAAAAAAGGTATTTTATTTGAATACTGATGCGGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAAGTTATCAATAATCCCAGCTACCGTCAGAGGGCTCAGAAGCTTTCAGAAATCCACAA
GGATCAACCTGGTCACCCTGTCAATCGGACTGTCTATTGGATCGATTATATTCTCCGTCA
CGATGGAGCCCATCACCTCCGTGCCGCTGTCCATCAAATCTCATTCTGTCAGTATTTTTT
ACTGGATATTGCCTTTGTGCTTCTGCTTGGTGCTGCCTTGTTTTACTTCCTCTTGTCCTG
GGTGACAAAATTTATCTACAGAAAAATCAAAAGTTTGTGGTCTAGAAATAAGCATAGCAC
AGTTAATGGACATTACCCTAATGGAATCCTCAATGGCAAGTATAAAAGAAATGGCCATAT
TAAACATGAAAAGAAGGTGAAATGAGCCAACAGCCCACCTGATAGTCACCAATCTGTTCA
GTCATTGAATTTTTATTGCTATAATTTAGGCTAACAACTACTAAAAGGAAAACATCAGTA
AATAATTCTAATACTCCCTTATCTGATCTTACTAATGAAATTCTGTGGAATTAAGATGGC
TGTAAAAAGCACAAACCTAAAATGCAAAAAAAGGTATTTTATTTGAATACTGATGCGGAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               20-594, gnl|bosTau2|chr24 (20168412-20168984)
               

               
               20-594, gnl|Hg17|chr4 (115954683-115955254)
               

               
               20-594, gnl|Mm7|chr3 (125705419-125704868)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               20-594, gnl|bosTau2|chr24 (20168412-20168984)
               

               
               20-594, gnl|Hg17|chr4 (115954683-115955254)
               

               
               20-594, gnl|Mm7|chr3 (125705419-125704868)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fbs (0.175346)
               

               
               sin (0.174948)
               

               
               nco (0.161734)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)
               

               
               sin (0.174948)
               

               
               nco (0.161734)

	20-594, gnl\|bosTau2\|chr24 (20168412-20168984)
	20-594, gnl\|Hg17\|chr4 (115954683-115955254)
	20-594, gnl\|Mm7\|chr3 (125705419-125704868)