Non-Coding RNA Search

Ss1.1-Pig3-SRG8007N20.3

Sequence:


               
               TTGGGTTGCTGTGACTGGGAAGTTGACCCCTGTGCTTTTTACAGCTTGTTTCTCCTTCCA
CTACTTAAAGTGTCCAAGATGCTTTAAGGTGAGCTGCTTGTCCCAGTATTTAGTTCCTAA
GTTAAGGGAAACCCCAGGTCATACCAAGGAAGGGGAGCAGAATGTGAATAGGACCTCTTG
AAAGTGACAAGGTTGGGGAGTGTTTAGAGATTTGGTGTCTCTCCTAGCTTTACCAAGCTT
CAGTTTGTTTTCGGTAGTACTTGTAATCATTCTCATTCTTCACGGTGCCAGCTTTGCTTG
AATAAGTTAGAGGTAGCATTATATAGTGTCCTCTAACGTTTGGAATAGTGAGAAAATAAG
GGGTGCCGATTGGTCGAACTTGAATTCTAGACTGTTAAGATGGCAGCTTTGTGCCAGAGG
AGTGGGTGGTTCTTAATAGACTTCAGCCATCCCACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGGGTTGCTGTGACTGGGAAGTTGACCCCTGTGCTTTTTACAGCTTGTTTCTCCTTCCA
CTACTTAAAGTGTCCAAGATGCTTTAAGGTGAGCTGCTTGTCCCAGTATTTAGTTCCTAA
GTTAAGGGAAACCCCAGGTCATACCAAGGAAGGGGAGCAGAATGTGAATAGGACCTCTTG
AAAGTGACAAGGTTGGGGAGTGTTTAGAGATTTGGTGTCTCTCCTAGCTTTACCAAGCTT
CAGTTTGTTTTCGGTAGTACTTGTAATCATTCTCATTCTTCACGGTGCCAGCTTTGCTTG
AATAAGTTAGAGGTAGCATTATATAGTGTCCTCTAACGTTTGGAATAGTGAGAAAATAAG
GGGTGCCGATTGGTCGAACTTGAATTCTAGACTGTTAAGATGGCAGCTTTGTGCCAGAGG
AGTGGGTGGTTCTTAATAGACTTCAGCCATCCCACT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-456, gnl|bosTau2|chr2 (62147478-62147931)
               

               
               4-456, gnl|Hg17|chr2 (208456765-208456304)
               

               
               4-456, gnl|Mm7|chr1 (64976104-64975620)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-456, gnl|bosTau2|chr2 (62147478-62147931)
               

               
               4-456, gnl|Hg17|chr2 (208456765-208456304)
               

               
               4-456, gnl|Mm7|chr1 (64976104-64975620)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               sag (0.182715)
               

               
               rec (0.17307)
               

               
               ova (0.129132)
               

               
               spc (0.113366)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sag (0.182715)
               

               
               rec (0.17307)
               

               
               ova (0.129132)
               

               
               spc (0.113366)

	4-456, gnl\|bosTau2\|chr2 (62147478-62147931)
	4-456, gnl\|Hg17\|chr2 (208456765-208456304)
	4-456, gnl\|Mm7\|chr1 (64976104-64975620)