Non-Coding RNA Search

Ss1.1-Pig3-SRG8008B07.3

Sequence:


               
               AAAATAAATTATTCTTTTAGCAATGAGGGGGAAGAAAAGCAGCGTTAATGGTGTATTTCA
CCAAAAATCATTAACTCATCACATTTTAAATAATTTATGAACAAGTCCCTTTATGTCAGA
TGGTTAGAACTAGTGAAACGTATTGCAAAAGGTCTCACTTATATGTTAAATGTGGAAAGA
AAACAAAATTGCGCATACTTTGCCATTATTGATTGAGTGTGTGTTCTTAATTCTTGGTTC
CAGAAAAACAGCTTCTCTTTCTCAGAAACACAGGGAGGAATGTGAGCACGGTGGCTTGGA
CATTCTCATCAACAGTCACCTAAGTAGTGGCACTTTCGTGATCATTTTGATGAGAATTGT
AACTTCTGTACAAGTAGTGTTTTCTCAGGTTTGTACTCCTACCTCTAGGTGCCTCATTTT
GCATCTGATAAAAGGTGCAAAATATACTTCTCAATAGGGGGATTTGATTTATTGTTTTAA
TTTTTTATGCTATGAATCTTATTAAATGCCAGTCCTTGTTTTGTAACTCTTAAGATTATA
AAAAATAGAATATTTTTACTTTCTCTATCCAAAACGTAATGTATGTTCACTATAAAAAAT
TAAAAGTATGCATAAAAGTAGCCAGATTATTCTTTTATTTTACAATTCAATTTCCAAAAG
CAGAGAGCGGGCTAGGAGATACTGATAAAATTCATAGCTACTTTGTTTTCGAATGTTCTA
GCCCATTTGCTATCCAATAGAAGAATAATGTGAACCACATGTAATTTTAAATTTTCTTGT
AACTACATTTTAAAATATTTTTTAAATGAAATTCTGGTAATTTATGTAATACACTTAAAG
TAACACTATAAAAATTGGATTTTTACATTCTTTTTTTCATACCAATTCTCCAAAAGCTGG
TAAGTTTTCCATTTATAGCACATCTCGGTTTGGACCAGCCACATTCTAAGTGCTCAATTA
CTACATGCCAGTTGAGTACAGTTCTGGAATAATCATTACAAAGTGCAAAAGGACAGGTGA
AATAGATCTTGGTGAAATTGTAGATAGCAAATGTAAAATGTAGAAATAAAATGTAAGGAA
TATAATGTCTTAATGTTCAACATTTTTTTAATGTCCTTTTCCTAAGAGGGTAGAAAGCAT
TAATTATAGTTTGCTGTTTTTTATGTGAAAGAATTTTAAGTTATAAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAATAAATTATTCTTTTAGCAATGAGGGGGAAGAAAAGCAGCGTTAATGGTGTATTTCA
CCAAAAATCATTAACTCATCACATTTTAAATAATTTATGAACAAGTCCCTTTATGTCAGA
TGGTTAGAACTAGTGAAACGTATTGCAAAAGGTCTCACTTATATGTTAAATGTGGAAAGA
AAACAAAATTGCGCATACTTTGCCATTATTGATTGAGTGTGTGTTCTTAATTCTTGGTTC
CAGAAAAACAGCTTCTCTTTCTCAGAAACACAGGGAGGAATGTGAGCACGGTGGCTTGGA
CATTCTCATCAACAGTCACCTAAGTAGTGGCACTTTCGTGATCATTTTGATGAGAATTGT
AACTTCTGTACAAGTAGTGTTTTCTCAGGTTTGTACTCCTACCTCTAGGTGCCTCATTTT
GCATCTGATAAAAGGTGCAAAATATACTTCTCAATAGGGGGATTTGATTTATTGTTTTAA
TTTTTTATGCTATGAATCTTATTAAATGCCAGTCCTTGTTTTGTAACTCTTAAGATTATA
AAAAATAGAATATTTTTACTTTCTCTATCCAAAACGTAATGTATGTTCACTATAAAAAAT
TAAAAGTATGCATAAAAGTAGCCAGATTATTCTTTTATTTTACAATTCAATTTCCAAAAG
CAGAGAGCGGGCTAGGAGATACTGATAAAATTCATAGCTACTTTGTTTTCGAATGTTCTA
GCCCATTTGCTATCCAATAGAAGAATAATGTGAACCACATGTAATTTTAAATTTTCTTGT
AACTACATTTTAAAATATTTTTTAAATGAAATTCTGGTAATTTATGTAATACACTTAAAG
TAACACTATAAAAATTGGATTTTTACATTCTTTTTTTCATACCAATTCTCCAAAAGCTGG
TAAGTTTTCCATTTATAGCACATCTCGGTTTGGACCAGCCACATTCTAAGTGCTCAATTA
CTACATGCCAGTTGAGTACAGTTCTGGAATAATCATTACAAAGTGCAAAAGGACAGGTGA
AATAGATCTTGGTGAAATTGTAGATAGCAAATGTAAAATGTAGAAATAAAATGTAAGGAA
TATAATGTCTTAATGTTCAACATTTTTTTAATGTCCTTTTCCTAAGAGGGTAGAAAGCAT
TAATTATAGTTTGCTGTTTTTTATGTGAAAGAATTTTAAGTTATAAAC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-687, gnl|bosTau2|chr9 (37011160-37010481)
               

               
               1-687, gnl|Mm7|chr9 (87293935-87291400)
               


               
               697-1188, gnl|bosTau2|chr9 (37010449-37009945)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-687, gnl|bosTau2|chr9 (37011160-37010481)
               

               
               1-687, gnl|Mm7|chr9 (87293935-87291400)
               


               
               697-1188, gnl|bosTau2|chr9 (37010449-37009945)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

Help | Less info


               
               tra (0.246184)
               

               
               mgp (0.230681)
               

               
               fhi (0.169578)
               

               
               cbl (0.114797)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.246184)
               

               
               mgp (0.230681)
               

               
               fhi (0.169578)
               

               
               cbl (0.114797)

	1-687, gnl\|bosTau2\|chr9 (37011160-37010481)
	1-687, gnl\|Mm7\|chr9 (87293935-87291400)

	697-1188, gnl\|bosTau2\|chr9 (37010449-37009945)