Non-Coding RNA Search

Ss1.1-Pig3-SRG8008C01.3

Sequence:


               
               AGTTTTTGAACATCCATGGATACAAATGCTTCCCCTTGTTCCCAGGTAGAAGGGGCATGG
GCCCCACCTCAGAGCCATTCTTAACTCACCACCAAGGAGGACTTGTGGCATCAGCTCTCC
TTCTGCTGACCACACAAGATTTGATACACTGAGAACATTCATTGGATTCGTTTACTGAGC
ACCTGCTTGTGTGCTTAGGTACTGTTCAAGCTTCGAGAGACACGGCAGTAAGTTATATAA
TCAGAAAGTTAAATGGCTCATGTGAAAAAGGAATTATATTCAAAAATAGGTCAAATGCTG
GATGTGACCACTCGGCAAGAAAGGCACCAGGTAAGACAGTCTTCTACACACCCCACAGAG
CCCCTTTTCCTCCTTCAGAAATTGAAAGTGAGTTTCCTATCCCAAAGGATCTTCAAAACT
GTGTCTGAATAGTTTTACCAGTAACTTCCAATTATTTCAGACTGGTAAGGGGGTAATTCT
AGCTACAATGAGGTATTTAAAGCTTAAAAAAAAACTCTTTAAGAAAAAAAATTGTTAGAT
TTCAAATACCTAAAGATGAAGGTCTAATTATCCATCTAATTTGGCCCTGATCTCTCCATT
TTCTACCACACACTGTACCCCTTCATTACCTGTAACTAACTGTCAGCTAACGATGACCCT
CTCACTGCTGCCTCTGGAGCAGAGGTTGGCAAACTACGACCAACCCCCTGTCTTTGTAAA
TAAAGTTTTACTGGGACACAGCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTTTTTGAACATCCATGGATACAAATGCTTCCCCTTGTTCCCAGGTAGAAGGGGCATGG
GCCCCACCTCAGAGCCATTCTTAACTCACCACCAAGGAGGACTTGTGGCATCAGCTCTCC
TTCTGCTGACCACACAAGATTTGATACACTGAGAACATTCATTGGATTCGTTTACTGAGC
ACCTGCTTGTGTGCTTAGGTACTGTTCAAGCTTCGAGAGACACGGCAGTAAGTTATATAA
TCAGAAAGTTAAATGGCTCATGTGAAAAAGGAATTATATTCAAAAATAGGTCAAATGCTG
GATGTGACCACTCGGCAAGAAAGGCACCAGGTAAGACAGTCTTCTACACACCCCACAGAG
CCCCTTTTCCTCCTTCAGAAATTGAAAGTGAGTTTCCTATCCCAAAGGATCTTCAAAACT
GTGTCTGAATAGTTTTACCAGTAACTTCCAATTATTTCAGACTGGTAAGGGGGTAATTCT
AGCTACAATGAGGTATTTAAAGCTTAAAAAAAAACTCTTTAAGAAAAAAAATTGTTAGAT
TTCAAATACCTAAAGATGAAGGTCTAATTATCCATCTAATTTGGCCCTGATCTCTCCATT
TTCTACCACACACTGTACCCCTTCATTACCTGTAACTAACTGTCAGCTAACGATGACCCT
CTCACTGCTGCCTCTGGAGCAGAGGTTGGCAAACTACGACCAACCCCCTGTCTTTGTAAA
TAAAGTTTTACTGGGACACAGCCC

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               135-565, gnl|bosTau2|chrX (37066126-37066576)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               135-565, gnl|bosTau2|chrX (37066126-37066576)

Expressed library(ies): 6 entry(ies)

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Expressed library(ies): 6 entry(ies)

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               gul (0.177588)
               

               
               isp (0.150376)
               

               
               nmm (0.132802)
               

               
               thg (0.126791)
               

               
               tra (0.123092)
               

               
               pgl (0.118483)

Expressed library(ies): 6 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               isp (0.150376)
               

               
               nmm (0.132802)
               

               
               thg (0.126791)
               

               
               tra (0.123092)
               

               
               pgl (0.118483)

	gul (0.177588)
	isp (0.150376)
	nmm (0.132802)
	thg (0.126791)
	tra (0.123092)
	pgl (0.118483)