Non-Coding RNA Search

Ss1.1-Pig3-SRG8008I18.3

Sequence:


               
               TGTTCTGTTTCAGTGTGCTTTAATAAAAATAGGTTTGTATAGAAGACATTGACTTCTTAT
TTACTTCCCAGTGAAAATGACAGTTACTGAAAAGAGGAATTTTTTAAAAGCCATCTCAAT
GTGAAAACACATCTTATGGTGCTTTTAACTTCAGATAGGAGAGTGGTTTTTATAGAATAT
CTTTGTCAAGAAAGCCCTATAAAGACCTTGAGAAGAATGTAAGGCATTCGTATTTTTAAC
CACCAATTGAAGTTTTAGAGCTCAGTGTACAGACGTGTTTTATTAATTCAGGGAGCGAGA
GGGGCGGTGCTAATATTATTCCTATGGCGTTCATTTTACGTCAATAATATTACTGTTTCT
GGAATGGTTAAAAATTGAGGACTCTTAAGGGTTCAAATTGGTGATTTTCCCCTGCTATTT
AATAGTTTTGCTATATCACAAACCCATCTCTTAATATATTTAAATTGGTTTATAACTTGA
TGCTCCTATGTAGCTTCTCACTTACCTTTGAAAATGACATAGTTAAAATTTTGGTAGATT
TAAAAAATACCAATTACGTTCAATAAAAAAAACACTTGGAGGTGTCCTGATTTTACTTCA
CAGGTGGGTGTCCAGGTAAGATCATTGTTTCTATTTAAGACTGAACTCCTGCGTGTTTAG
ACTTGCTTGCTTGGGTGGGCTGCTTGGTTTGCTGTAACAATTGTATCATGTGCATGAAAT
GTAAACAGAACTTCTGAAATGAGTTACTTGCATATTGAACAGTTAGTCTTTATTTTTAGA
ACTACTTGTATCTATGTTGAGTTTTATTTCTAATTACAGGGTTAATTTATATTTTTCTAA
ATTGAGCGACTACTTGAACTATGTTTACTAAACCATTATGAAGTTGAACTGTGCTGTTGC
TAATTGTTAAAGCAGTTTTAACTTTAGATTGAACTTAACTAAACCAAAAGATAAATTACA
ACTTTAAAATCGTGGCCGGGAATTGGAAGATCACATTAAAAAAAAAAAAAAAATCCTAAA
CGTTCACCTAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTTCTGTTTCAGTGTGCTTTAATAAAAATAGGTTTGTATAGAAGACATTGACTTCTTAT
TTACTTCCCAGTGAAAATGACAGTTACTGAAAAGAGGAATTTTTTAAAAGCCATCTCAAT
GTGAAAACACATCTTATGGTGCTTTTAACTTCAGATAGGAGAGTGGTTTTTATAGAATAT
CTTTGTCAAGAAAGCCCTATAAAGACCTTGAGAAGAATGTAAGGCATTCGTATTTTTAAC
CACCAATTGAAGTTTTAGAGCTCAGTGTACAGACGTGTTTTATTAATTCAGGGAGCGAGA
GGGGCGGTGCTAATATTATTCCTATGGCGTTCATTTTACGTCAATAATATTACTGTTTCT
GGAATGGTTAAAAATTGAGGACTCTTAAGGGTTCAAATTGGTGATTTTCCCCTGCTATTT
AATAGTTTTGCTATATCACAAACCCATCTCTTAATATATTTAAATTGGTTTATAACTTGA
TGCTCCTATGTAGCTTCTCACTTACCTTTGAAAATGACATAGTTAAAATTTTGGTAGATT
TAAAAAATACCAATTACGTTCAATAAAAAAAACACTTGGAGGTGTCCTGATTTTACTTCA
CAGGTGGGTGTCCAGGTAAGATCATTGTTTCTATTTAAGACTGAACTCCTGCGTGTTTAG
ACTTGCTTGCTTGGGTGGGCTGCTTGGTTTGCTGTAACAATTGTATCATGTGCATGAAAT
GTAAACAGAACTTCTGAAATGAGTTACTTGCATATTGAACAGTTAGTCTTTATTTTTAGA
ACTACTTGTATCTATGTTGAGTTTTATTTCTAATTACAGGGTTAATTTATATTTTTCTAA
ATTGAGCGACTACTTGAACTATGTTTACTAAACCATTATGAAGTTGAACTGTGCTGTTGC
TAATTGTTAAAGCAGTTTTAACTTTAGATTGAACTTAACTAAACCAAAAGATAAATTACA
ACTTTAAAATCGTGGCCGGGAATTGGAAGATCACATTAAAAAAAAAAAAAAAATCCTAAA
CGTTCACCTAGC

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               1-519, gnl|bosTau2|chr16 (10979623-10979107)
               

               
               1-519, gnl|Hg17|chr1 (217218360-217218879)
               

               
               1-519, gnl|Mm7|chr1 (184428354-184427788)
               


               
               539-1001, gnl|bosTau2|chr16 (10979119-10978668)
               

               
               539-1001, gnl|Hg17|chr1 (217218868-217219286)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-519, gnl|bosTau2|chr16 (10979623-10979107)
               

               
               1-519, gnl|Hg17|chr1 (217218360-217218879)
               

               
               1-519, gnl|Mm7|chr1 (184428354-184427788)
               


               
               539-1001, gnl|bosTau2|chr16 (10979119-10978668)
               

               
               539-1001, gnl|Hg17|chr1 (217218868-217219286)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               pla (0.133672)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	1-519, gnl\|bosTau2\|chr16 (10979623-10979107)
	1-519, gnl\|Hg17\|chr1 (217218360-217218879)
	1-519, gnl\|Mm7\|chr1 (184428354-184427788)

	539-1001, gnl\|bosTau2\|chr16 (10979119-10978668)
	539-1001, gnl\|Hg17\|chr1 (217218868-217219286)