Non-Coding RNA Search

Ss1.1-Pig3-SRG8009C04.5

Sequence:


               
               GCAGTTCATCAGCAGTGGACTGCCCAAGGTGGCCGTGCCCTCCACCATCCACTGTGACCA
TCTGATCGAGGCCCAGCTCGGGGGCGAGAAAGACCTGCGTCGGGCCAAGGACATAAACCA
GGAAGTGTATAACTTCCTGGCAACTGCAGGTGCCAAGTACGGCGTGGGCTTCTGGAGGCC
TGGCTCCGGAATCATTCACCAGATCATTCTGGAAAACTACGCGTACCCTGGGGTTCTTCT
GATCGGCACTGATTCCCACACCCCCAATGGCGGTGGCCTGGGGGGCATCTGCATTGGAGT
CGGGGGTGCTGATGCCGTGGATGTCATGGCCGGGATCCCCTGGGAGCTGAAGTGCCCCAA
GGTGATTGGTGTGAAGCTGACGGGCTCGCTCTCTGGCTGGACCTCACCCAAAGATGTGAT
CCTGAAGGTGGCGGGCATCCTCACCGTGAAAGGTGGCACGGGTGCCATCGTGGAGTACCA
TGGGCCTGGCGTGGACTCCATCTCCTGCACTGGCATGGCGACAATCTGCAACATGGGCGC
AGAGATCGGGGCCACCACCTCCGTGTTTCCTTACAACCACAGGATGAAGAAGTACCTGAG
CAAGACAGGCCGGGCAGATATTGCCAACCTCGCTGACGAATTCAAGGACCACTTGGTACC
TGACCCTGGCTGCCATTATGACCAAGTGATTGAAATTAACCTCAGCGAGCTGAAGCCACA
CATCAACGGGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGTTCATCAGCAGTGGACTGCCCAAGGTGGCCGTGCCCTCCACCATCCACTGTGACCA
TCTGATCGAGGCCCAGCTCGGGGGCGAGAAAGACCTGCGTCGGGCCAAGGACATAAACCA
GGAAGTGTATAACTTCCTGGCAACTGCAGGTGCCAAGTACGGCGTGGGCTTCTGGAGGCC
TGGCTCCGGAATCATTCACCAGATCATTCTGGAAAACTACGCGTACCCTGGGGTTCTTCT
GATCGGCACTGATTCCCACACCCCCAATGGCGGTGGCCTGGGGGGCATCTGCATTGGAGT
CGGGGGTGCTGATGCCGTGGATGTCATGGCCGGGATCCCCTGGGAGCTGAAGTGCCCCAA
GGTGATTGGTGTGAAGCTGACGGGCTCGCTCTCTGGCTGGACCTCACCCAAAGATGTGAT
CCTGAAGGTGGCGGGCATCCTCACCGTGAAAGGTGGCACGGGTGCCATCGTGGAGTACCA
TGGGCCTGGCGTGGACTCCATCTCCTGCACTGGCATGGCGACAATCTGCAACATGGGCGC
AGAGATCGGGGCCACCACCTCCGTGTTTCCTTACAACCACAGGATGAAGAAGTACCTGAG
CAAGACAGGCCGGGCAGATATTGCCAACCTCGCTGACGAATTCAAGGACCACTTGGTACC
TGACCCTGGCTGCCATTATGACCAAGTGATTGAAATTAACCTCAGCGAGCTGAAGCCACA
CATCAACGGGCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-393, gnl|bosTau2|chr14 (38494253-38493888)
               

               
               5-393, gnl|Hg17|chr8 (100429413-100429033)
               

               
               5-393, gnl|Mm7|chr10 (22101007-22101395)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-393, gnl|bosTau2|chr14 (38494253-38493888)
               

               
               5-393, gnl|Hg17|chr8 (100429413-100429033)
               

               
               5-393, gnl|Mm7|chr10 (22101007-22101395)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ton (0.1755)
               

               
               eru (0.120048)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ton (0.1755)
               

               
               eru (0.120048)

	5-393, gnl\|bosTau2\|chr14 (38494253-38493888)
	5-393, gnl\|Hg17\|chr8 (100429413-100429033)
	5-393, gnl\|Mm7\|chr10 (22101007-22101395)