Non-Coding RNA Search

Ss1.1-Pig3-SRG8009F01.3

Sequence:


               
               ATTTTTTTATTCTATAACCAAAAAAGGTCATCCTGAATCCCTTACGGAGTTCTGAAGCTT
TAGGGACAGGAAATCTGTGCTTCACTGAAGACAAATATCTAAACATCGAAAAACTTATAC
ATGGAATCTAAAATGTGATATAAATGAGCTTATTTACAAAACAGAAACAAACTCACAGAC
CATAGAAAACAAACTTATGGCTACCAAAGGGGGAAAGGGGGAAAGGATAAACTAGGAGTT
TGAGATTAGCAGTTACAAACTACTACATATGAGAGATAAACAGCAAGGTCCAAATAAGCA
TAATGGGAAAAATGCAAAATAAAGCTTTAGGGACCCAGATCTATTTCTCATTTTAATTCT
GATGAGACATTGTGTCATGGAAACAACATGGGTTGTTCCATGAGTTGAGAGCCAGGTGGA
TAAGAAACCTGGCTTTACCACTTCTCAGGACTGTGATCTAAGACAAGCATGCCTCAAGCA
TGTTGATCTCAGGACTCTCTACTCTTAAAAATCATTGAGAACCCAAAGAGCTTTTGTTGA
TGTGCGTTATAGCTGTTGAAATTTACTGTATTCAAAATTAAAATGAAGAAAAATTGTAAA
TAATTATTTACTAATTCATTTTAAGATGACAACAATAAACCCATTACATGTTTTTATAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTTTTTATTCTATAACCAAAAAAGGTCATCCTGAATCCCTTACGGAGTTCTGAAGCTT
TAGGGACAGGAAATCTGTGCTTCACTGAAGACAAATATCTAAACATCGAAAAACTTATAC
ATGGAATCTAAAATGTGATATAAATGAGCTTATTTACAAAACAGAAACAAACTCACAGAC
CATAGAAAACAAACTTATGGCTACCAAAGGGGGAAAGGGGGAAAGGATAAACTAGGAGTT
TGAGATTAGCAGTTACAAACTACTACATATGAGAGATAAACAGCAAGGTCCAAATAAGCA
TAATGGGAAAAATGCAAAATAAAGCTTTAGGGACCCAGATCTATTTCTCATTTTAATTCT
GATGAGACATTGTGTCATGGAAACAACATGGGTTGTTCCATGAGTTGAGAGCCAGGTGGA
TAAGAAACCTGGCTTTACCACTTCTCAGGACTGTGATCTAAGACAAGCATGCCTCAAGCA
TGTTGATCTCAGGACTCTCTACTCTTAAAAATCATTGAGAACCCAAAGAGCTTTTGTTGA
TGTGCGTTATAGCTGTTGAAATTTACTGTATTCAAAATTAAAATGAAGAAAAATTGTAAA
TAATTATTTACTAATTCATTTTAAGATGACAACAATAAACCCATTACATGTTTTTATAAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               88-291, gnl|bosTau2|chr29 (4520177-4520379)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               88-291, gnl|bosTau2|chr29 (4520177-4520379)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               eli (0.151814)
               

               
               spl (0.143184)
               

               
               cbl (0.114797)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eli (0.151814)
               

               
               spl (0.143184)
               

               
               cbl (0.114797)