Non-Coding RNA Search

Ss1.1-Pig3-SRG8009I02.3

Sequence:


               
               TCCAGTTTAACTTTTAGCATCATGAATGATGTCTCATCCAGATTTCAAATTTGAACAACT
CTAATCCTTTTGCGTTATATGAAATTACTATTATTTTCTACAGTTCTAGCATATTAAAAT
TCTATTGGATTTCAAAAAGGGTCTAATAACCAATTGACTATACAAATGTCAACTTGTAAT
ACTCAATGAATTTTTTTTTGCTGTTTACACTTTACATTTTGCTTTAGTGAACATACGAGT
ATTTATTTTGAAAAGGCACCATTACACAGTATATCCTACATTTATCACATTTCTTAAAAG
TGTTAAGATTCTATGACTCATTTCTATGTATTTTTCTTACTTTACAAAATAACTTGAAAC
TATAGATTTTGTAACACTTAATTTGAGCAGCTTCTTTTTTATTATATTGAATTATAAAGT
GCATGTTACCTTAGAAAAATTAATATTTGCTGCTTTACTCTTTTGCAAAAACATTTGCTG
TAATGAAAGAATTTGTATTTCCAAAATGTACCTTGATTGCATTTTGTAATATTTACTGCT
TTATTCCAAATCCTGCTTCAAAGTATTGAACTGGGCATGAAATATTAAAATATTAATCCA
GAACCCATATAAACTGGATGTTGCTTAAAATCTGTATCACTGCCATGTTGGAAACCCAAA
CTGCTTTTGTGATGTTTCAAATTAATAAAAACCATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCAGTTTAACTTTTAGCATCATGAATGATGTCTCATCCAGATTTCAAATTTGAACAACT
CTAATCCTTTTGCGTTATATGAAATTACTATTATTTTCTACAGTTCTAGCATATTAAAAT
TCTATTGGATTTCAAAAAGGGTCTAATAACCAATTGACTATACAAATGTCAACTTGTAAT
ACTCAATGAATTTTTTTTTGCTGTTTACACTTTACATTTTGCTTTAGTGAACATACGAGT
ATTTATTTTGAAAAGGCACCATTACACAGTATATCCTACATTTATCACATTTCTTAAAAG
TGTTAAGATTCTATGACTCATTTCTATGTATTTTTCTTACTTTACAAAATAACTTGAAAC
TATAGATTTTGTAACACTTAATTTGAGCAGCTTCTTTTTTATTATATTGAATTATAAAGT
GCATGTTACCTTAGAAAAATTAATATTTGCTGCTTTACTCTTTTGCAAAAACATTTGCTG
TAATGAAAGAATTTGTATTTCCAAAATGTACCTTGATTGCATTTTGTAATATTTACTGCT
TTATTCCAAATCCTGCTTCAAAGTATTGAACTGGGCATGAAATATTAAAATATTAATCCA
GAACCCATATAAACTGGATGTTGCTTAAAATCTGTATCACTGCCATGTTGGAAACCCAAA
CTGCTTTTGTGATGTTTCAAATTAATAAAAACCATC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               336-696, gnl|bosTau2|chr17 (23736463-23736837)
               

               
               336-696, gnl|Hg17|chrX (119174715-119174401)
               

               
               336-696, gnl|Mm7|chrX (33289887-33289571)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               336-696, gnl|bosTau2|chr17 (23736463-23736837)
               

               
               336-696, gnl|Hg17|chrX (119174715-119174401)
               

               
               336-696, gnl|Mm7|chrX (33289887-33289571)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cbe (0.239234)
               

               
               sin (0.174948)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.239234)
               

               
               sin (0.174948)

	336-696, gnl\|bosTau2\|chr17 (23736463-23736837)
	336-696, gnl\|Hg17\|chrX (119174715-119174401)
	336-696, gnl\|Mm7\|chrX (33289887-33289571)