Ss1.1-Pig3-SRG8009K22.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TAAGGCCGCCCAGCTCTGGAAGGTGGGGGAGGCACAGTCCAAGGAGACGCTCTCCGGACA CACAGATAAGGTGACGGCTGCCAAATTCAAGCTAACAAGGCACCAGGCGGTGACTGGGAG CCGGGACCGGACTGTGAAGGAGTGGGACCTCGGCCGCGCCTACTGCTCCAGGACCATCAG TGTCGTGTCCTACTGTAACGACGTGGTGTGTGGGGACCACATCATCATAAGCGGCCACAA TGACCAGAAGATCCGGTTCTGGGACAGCAGGGGGCCCCGCTGCACCCAGGTCATCCCCGT GCAGGGCCGGGTCACCTCCCTGAGCCTCAGCCACGACCAGCTGCATCTGCTTAGCTGCTC CCGAGATGACACCCTCAAAGTCATCGACCTGCGCGTCAGCAACATCCGCCAGGTGTTCAG GGCTGATGGCTTCAAGTGTGGTTCCGACTGGACCAAAGCTGTGTTCAGCCCAGACAGAAG CTATGCACTGGCAGGCTCCTGGGATGGAGCCCTTTACATCTGGGACGTGGACACTGGGAA GCTGGAGAGCAGCCTCCGGGGACCCCACTGTGCTGCTGTCAACGCCGTGGCCTGGTGCTA CTCCGGGAGCCACGTGGCGAGCGTGGACCAGGCCAGGAAGCTTGTGCTCTGGCACTAGTG CCACGTCTGCCCAGCCTGAGCTGGCCCTCTAGTCGAAGCCTGAAGCCAGGGGACAGCTTC CCACCACCCGAGAGGCTCCAGGGCCAGGCGGGGGTGGGGGTGAGGGCTCGGGGCACTTGA TAGGTAAGAAGGCCTGGCGGGACCTGGTCTGTTTGTTTAAAAAGTGTGGGTTGGCAGGGC GGGTTCGGATTACGGTATTGTTTCATTTTTTAACTCTGTCTTCACTTTCTTGGGCATAGT GGAAAAAAAATT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TAAGGCCGCCCAGCTCTGGAAGGTGGGGGAGGCACAGTCCAAGGAGACGCTCTCCGGACA CACAGATAAGGTGACGGCTGCCAAATTCAAGCTAACAAGGCACCAGGCGGTGACTGGGAG CCGGGACCGGACTGTGAAGGAGTGGGACCTCGGCCGCGCCTACTGCTCCAGGACCATCAG TGTCGTGTCCTACTGTAACGACGTGGTGTGTGGGGACCACATCATCATAAGCGGCCACAA TGACCAGAAGATCCGGTTCTGGGACAGCAGGGGGCCCCGCTGCACCCAGGTCATCCCCGT GCAGGGCCGGGTCACCTCCCTGAGCCTCAGCCACGACCAGCTGCATCTGCTTAGCTGCTC CCGAGATGACACCCTCAAAGTCATCGACCTGCGCGTCAGCAACATCCGCCAGGTGTTCAG GGCTGATGGCTTCAAGTGTGGTTCCGACTGGACCAAAGCTGTGTTCAGCCCAGACAGAAG CTATGCACTGGCAGGCTCCTGGGATGGAGCCCTTTACATCTGGGACGTGGACACTGGGAA GCTGGAGAGCAGCCTCCGGGGACCCCACTGTGCTGCTGTCAACGCCGTGGCCTGGTGCTA CTCCGGGAGCCACGTGGCGAGCGTGGACCAGGCCAGGAAGCTTGTGCTCTGGCACTAGTG CCACGTCTGCCCAGCCTGAGCTGGCCCTCTAGTCGAAGCCTGAAGCCAGGGGACAGCTTC CCACCACCCGAGAGGCTCCAGGGCCAGGCGGGGGTGGGGGTGAGGGCTCGGGGCACTTGA TAGGTAAGAAGGCCTGGCGGGACCTGGTCTGTTTGTTTAAAAAGTGTGGGTTGGCAGGGC GGGTTCGGATTACGGTATTGTTTCATTTTTTAACTCTGTCTTCACTTTCTTGGGCATAGT GGAAAAAAAATT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 42-165, gnl|bosTau2|chr15 (33824557-33824434) | |
| 42-165, gnl|canFam2|chr21 (28410821-28410691) | |
| 42-165, gnl|danRer3|chr15 (152351-152228) | |
| 42-165, gnl|dasNov1|scaffold_41467 (4541-4411) | |
| 42-165, gnl|echTel1|scaffold_175869 (5389-5259) | |
| 42-165, gnl|hg17|chr11 (72215389-72215525) | |
| 42-165, gnl|Hg17|chr11 (72215394-72215517) | |
| 42-165, gnl|loxAfr1|scaffold_1390 (112397-112267) | |
| 42-165, gnl|mm7|chr7 (97338254-97338124) | |
| 42-165, gnl|Mm7|chr7 (97338247-97338124) | |
| 42-165, gnl|monDom2|scaffold_74 (5188195-5188065) | |
| 42-165, gnl|oryCun1|scaffold_210920 (5141-5271) | |
| 42-165, gnl|panTro1|chr9 (73491341-73491477) | |
| 42-165, gnl|rheMac2|chr14 (70914188-70914318) | |
| 42-165, gnl|rn3|chr1 (158869660-158869530) | |
| 42-165, gnl|tetNig1|chrUn_random (135750956-135751092) | |
| 42-165, gnl|xenTro1|scaffold_1341 (138485-138600) | |
| 268-421, gnl|bosTau2|chr15 (33823029-33822876) | |
| 268-421, gnl|canFam2|chr21 (28409665-28409514) | |
| 268-421, gnl|danRer3|chr15 (132869-132733) | |
| 268-421, gnl|echTel1|scaffold_175869 (4232-4086) | |
| 268-421, gnl|hg17|chr11 (72217015-72217167) | |
| 268-421, gnl|Hg17|chr11 (72217049-72217202) | |
| 268-421, gnl|mm7|chr7 (97337015-97336864) | |
| 268-421, gnl|Mm7|chr7 (97336980-97336827) | |
| 268-421, gnl|monDom2|scaffold_74 (5184603-5184453) | |
| 268-421, gnl|oryCun1|scaffold_211550 (52593-52441) | |
| 268-421, gnl|panTro1|chr9 (73492971-73493123) | |
| 268-421, gnl|rheMac2|chr14 (70915779-70915931) | |
| 268-421, gnl|rn3|chr1 (158867933-158867782) | |
| 268-421, gnl|tetNig1|chrUn_random (135751600-135751717) | |
| 268-421, gnl|xenTro1|scaffold_1341 (141103-141239) | |
| 565-902, gnl|bosTau2|chr15 (33822112-33821771) | |
| 565-902, gnl|Hg17|chr11 (72217990-72218308) | |
| 565-902, gnl|Mm7|chr7 (97336186-97335885) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 42-165, gnl|bosTau2|chr15 (33824557-33824434) | |
| 42-165, gnl|canFam2|chr21 (28410821-28410691) | |
| 42-165, gnl|danRer3|chr15 (152351-152228) | |
| 42-165, gnl|dasNov1|scaffold_41467 (4541-4411) | |
| 42-165, gnl|echTel1|scaffold_175869 (5389-5259) | |
| 42-165, gnl|hg17|chr11 (72215389-72215525) | |
| 42-165, gnl|Hg17|chr11 (72215394-72215517) | |
| 42-165, gnl|loxAfr1|scaffold_1390 (112397-112267) | |
| 42-165, gnl|mm7|chr7 (97338254-97338124) | |
| 42-165, gnl|Mm7|chr7 (97338247-97338124) | |
| 42-165, gnl|monDom2|scaffold_74 (5188195-5188065) | |
| 42-165, gnl|oryCun1|scaffold_210920 (5141-5271) | |
| 42-165, gnl|panTro1|chr9 (73491341-73491477) | |
| 42-165, gnl|rheMac2|chr14 (70914188-70914318) | |
| 42-165, gnl|rn3|chr1 (158869660-158869530) | |
| 42-165, gnl|tetNig1|chrUn_random (135750956-135751092) | |
| 42-165, gnl|xenTro1|scaffold_1341 (138485-138600) | |
| 268-421, gnl|bosTau2|chr15 (33823029-33822876) | |
| 268-421, gnl|canFam2|chr21 (28409665-28409514) | |
| 268-421, gnl|danRer3|chr15 (132869-132733) | |
| 268-421, gnl|echTel1|scaffold_175869 (4232-4086) | |
| 268-421, gnl|hg17|chr11 (72217015-72217167) | |
| 268-421, gnl|Hg17|chr11 (72217049-72217202) | |
| 268-421, gnl|mm7|chr7 (97337015-97336864) | |
| 268-421, gnl|Mm7|chr7 (97336980-97336827) | |
| 268-421, gnl|monDom2|scaffold_74 (5184603-5184453) | |
| 268-421, gnl|oryCun1|scaffold_211550 (52593-52441) | |
| 268-421, gnl|panTro1|chr9 (73492971-73493123) | |
| 268-421, gnl|rheMac2|chr14 (70915779-70915931) | |
| 268-421, gnl|rn3|chr1 (158867933-158867782) | |
| 268-421, gnl|tetNig1|chrUn_random (135751600-135751717) | |
| 268-421, gnl|xenTro1|scaffold_1341 (141103-141239) | |
| 565-902, gnl|bosTau2|chr15 (33822112-33821771) | |
| 565-902, gnl|Hg17|chr11 (72217990-72218308) | |
| 565-902, gnl|Mm7|chr7 (97336186-97335885) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| cga (0.279096) | |
| ill (0.175593) | |
| eye (0.170503) | |
| ese (0.126502) | |
| clu (0.119646) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cga (0.279096) | |
| ill (0.175593) | |
| eye (0.170503) | |
| ese (0.126502) | |
| clu (0.119646) |