Non-Coding RNA Search

Ss1.1-Pig3-SRG8009L03.3

Sequence:


               
               CCAATTAGGCAGATAGCCCCCCCGCCCCCCAGCTGGATCAGGTAGAGACACAAAAGCACT
TTTCACCTGTATATGGAATATAACAACATAGCTACCAATCTAACAGGCCTGGGTATTCAA
GGCTTGCTTGGCCTGCATCCATGCTTAAACCCTGGGATGGGGGGATTCTTTGGGATTCAC
AGGGTGAAGGGTAGCTGTTCTTTCCATGCTGGGGAGTGGGAGGGAGGTATCAGCTGGCTC
TCATGCTCATGGTGGCTTGGCTTTGACTTTCCAAGGGGCAACACATAAAACTGGGAGGGT
TATCGGCTCCAAAGTTTAGGGTTTGCAGCCTCACTTCTTTTGGAAAGGTACCCTTTAAGG
TTCAAGAGAAATATTGGTTGCTCTGCTCCCTTGAAAACAGATGGCCTACCCTATACTGTT
GTCAATGCACACAAAATACAGCCTCATGCTCCCTGCAGCAAGACCCCTGAAAGTGATTCA
TGCTTCTGGCTGGCGTTCTGCATGTCTCGTGATTGTCTTGGGAATGTTTCACTGCTACCT
GCGCCCAGTGACTTTGCAGCACAAGAACCTGTTTCATGTAACTATGCAGAGTTGTTTGGA
CTTCATAGTGTGTCAGGTCCAGGTCAGGGGACCTGAAGAATCAATTGCTGTTGAGTTTGT
TTTTCAAAATGAATTAAAACACACTACTGTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCAATTAGGCAGATAGCCCCCCCGCCCCCCAGCTGGATCAGGTAGAGACACAAAAGCACT
TTTCACCTGTATATGGAATATAACAACATAGCTACCAATCTAACAGGCCTGGGTATTCAA
GGCTTGCTTGGCCTGCATCCATGCTTAAACCCTGGGATGGGGGGATTCTTTGGGATTCAC
AGGGTGAAGGGTAGCTGTTCTTTCCATGCTGGGGAGTGGGAGGGAGGTATCAGCTGGCTC
TCATGCTCATGGTGGCTTGGCTTTGACTTTCCAAGGGGCAACACATAAAACTGGGAGGGT
TATCGGCTCCAAAGTTTAGGGTTTGCAGCCTCACTTCTTTTGGAAAGGTACCCTTTAAGG
TTCAAGAGAAATATTGGTTGCTCTGCTCCCTTGAAAACAGATGGCCTACCCTATACTGTT
GTCAATGCACACAAAATACAGCCTCATGCTCCCTGCAGCAAGACCCCTGAAAGTGATTCA
TGCTTCTGGCTGGCGTTCTGCATGTCTCGTGATTGTCTTGGGAATGTTTCACTGCTACCT
GCGCCCAGTGACTTTGCAGCACAAGAACCTGTTTCATGTAACTATGCAGAGTTGTTTGGA
CTTCATAGTGTGTCAGGTCCAGGTCAGGGGACCTGAAGAATCAATTGCTGTTGAGTTTGT
TTTTCAAAATGAATTAAAACACACTACTGTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               16-691, gnl|bosTau2|chr13 (787174-787843)
               

               
               16-691, gnl|Hg17|chr20 (9458497-9459167)
               

               
               16-691, gnl|Mm7|chr2 (135810068-135810767)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-691, gnl|bosTau2|chr13 (787174-787843)
               

               
               16-691, gnl|Hg17|chr20 (9458497-9459167)
               

               
               16-691, gnl|Mm7|chr2 (135810068-135810767)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fcc (0.197785)
               

               
               fbs (0.175346)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               fbs (0.175346)

	16-691, gnl\|bosTau2\|chr13 (787174-787843)
	16-691, gnl\|Hg17\|chr20 (9458497-9459167)
	16-691, gnl\|Mm7\|chr2 (135810068-135810767)