Ss1.1-Pig3-SRG8009L10.3
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GCTGAACACTGTTAATCACAGGATGCTGGTAAAACTTAACAATGAAAAGCACATGCATTC
AATGGTGTGCAAATGCACTCTTATCGCAGTGGGTTTTGCACCTTACTCTCCTCAGATGCA
TTATTCTGCACCCCTACTCCCACCCCATCACTAGAACTTTATCTGCTTGGAGCCCAGAAA
TGGGGGCCAGTACTTCATCCAAATAGTTGGGGCTTGCTCACAAGCCTTGAGCCCAGTGAG
AAGCACAGCACTTTGAAAAATCAAATAGGCCTTCCATAGCTTTGTATATTTGCAGTTTTA
CATTTGTTATTAGTTTATAGCACTAATAACACATCAGTCATAAATAGGTAGTATCAATAC
GATAAATCTTAGAACATATTCTAGAAAAGCAGTACCTTGCTGCTATTATCCTTACTAATT
TGTACCCTAATAAGTATTACATACAGACCGTGTATGCATTATTTGTATTGTGTATATGCC
AACTGTAATACTTGGCCTCACTGATTAGCGATTAGAAAATACAGAGATTGTCATAGTGAA
AATAAGTCTTGGTCAGTTCAGATGATAATGTGAATCTAGTAAATGCTCTATTAGATATTC
TATTTTGTCCTCTATGCTTGTTTTATATGACAATGCATGCTGTTTGCTAAGTTAAAAAAA
ATAATAAATTATACCAATTTTAAGATTCAAGTGAAAAATTTGCACATATGCTGCTAAACA
CTCTGATATGTATTTTGTGGAATAATTATCTTATTCAATATTCATATGCATTTCATGTGG
CTTTTTTTCCCCTTGGAAATAATCATTCAAATATGTCTCTCTCCTTTTCTCTTGTAACCT
GGATTAAACTGCTTAATTCAACCTAAAACATTGTAAAGCCAGATTACCTCATTTTAACTG
TGAAAAAAGTTTAGTAGCTATGATGACATGATGTCATTTCTTGTATTTGATTTGAACTAC
CTAAACAGGCTTAAACTTAATAATAAACATAAAATTTGACAGGCAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GCTGAACACTGTTAATCACAGGATGCTGGTAAAACTTAACAATGAAAAGCACATGCATTC
AATGGTGTGCAAATGCACTCTTATCGCAGTGGGTTTTGCACCTTACTCTCCTCAGATGCA
TTATTCTGCACCCCTACTCCCACCCCATCACTAGAACTTTATCTGCTTGGAGCCCAGAAA
TGGGGGCCAGTACTTCATCCAAATAGTTGGGGCTTGCTCACAAGCCTTGAGCCCAGTGAG
AAGCACAGCACTTTGAAAAATCAAATAGGCCTTCCATAGCTTTGTATATTTGCAGTTTTA
CATTTGTTATTAGTTTATAGCACTAATAACACATCAGTCATAAATAGGTAGTATCAATAC
GATAAATCTTAGAACATATTCTAGAAAAGCAGTACCTTGCTGCTATTATCCTTACTAATT
TGTACCCTAATAAGTATTACATACAGACCGTGTATGCATTATTTGTATTGTGTATATGCC
AACTGTAATACTTGGCCTCACTGATTAGCGATTAGAAAATACAGAGATTGTCATAGTGAA
AATAAGTCTTGGTCAGTTCAGATGATAATGTGAATCTAGTAAATGCTCTATTAGATATTC
TATTTTGTCCTCTATGCTTGTTTTATATGACAATGCATGCTGTTTGCTAAGTTAAAAAAA
ATAATAAATTATACCAATTTTAAGATTCAAGTGAAAAATTTGCACATATGCTGCTAAACA
CTCTGATATGTATTTTGTGGAATAATTATCTTATTCAATATTCATATGCATTTCATGTGG
CTTTTTTTCCCCTTGGAAATAATCATTCAAATATGTCTCTCTCCTTTTCTCTTGTAACCT
GGATTAAACTGCTTAATTCAACCTAAAACATTGTAAAGCCAGATTACCTCATTTTAACTG
TGAAAAAAGTTTAGTAGCTATGATGACATGATGTCATTTCTTGTATTTGATTTGAACTAC
CTAAACAGGCTTAAACTTAATAATAAACATAAAATTTGACAGGCAAAA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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21-1005, gnl|bosTau2|chr1 (32181085-32182054) |
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21-1005, gnl|canFam2|chr33 (19432988-19433889) |
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21-1005, gnl|dasNov1|scaffold_8428 (44694-45600) |
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21-1005, gnl|echTel1|scaffold_325100 (165035-165986) |
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21-1005, gnl|hg17|chr3 (112927379-112928305) |
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21-1005, gnl|Hg17|chr3 (112927458-112928431) |
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21-1005, gnl|loxAfr1|scaffold_10937 (9661-10551) |
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21-1005, gnl|mm7|chr16 (45739191-45738318) |
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21-1005, gnl|Mm7|chr16 (45739119-45738177) |
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21-1005, gnl|monDom2|scaffold_24 (5620218-5621125) |
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21-1005, gnl|oryCun1|scaffold_213529 (67471-68383) |
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21-1005, gnl|panTro1|chr2 (114516611-114517539) |
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21-1005, gnl|rheMac2|chr2 (31834257-31835187) |
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21-1005, gnl|rn3|chr11 (56393064-56393898) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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21-1005, gnl|bosTau2|chr1 (32181085-32182054) |
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21-1005, gnl|canFam2|chr33 (19432988-19433889) |
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21-1005, gnl|dasNov1|scaffold_8428 (44694-45600) |
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21-1005, gnl|echTel1|scaffold_325100 (165035-165986) |
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21-1005, gnl|hg17|chr3 (112927379-112928305) |
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21-1005, gnl|Hg17|chr3 (112927458-112928431) |
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21-1005, gnl|loxAfr1|scaffold_10937 (9661-10551) |
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21-1005, gnl|mm7|chr16 (45739191-45738318) |
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21-1005, gnl|Mm7|chr16 (45739119-45738177) |
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21-1005, gnl|monDom2|scaffold_24 (5620218-5621125) |
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21-1005, gnl|oryCun1|scaffold_213529 (67471-68383) |
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21-1005, gnl|panTro1|chr2 (114516611-114517539) |
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21-1005, gnl|rheMac2|chr2 (31834257-31835187) |
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21-1005, gnl|rn3|chr11 (56393064-56393898) |
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bfe (0.299715) |
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tbr (0.154178) |
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ste (0.135208) |
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eje (0.0988338) |
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bfe (0.299715) |
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tbr (0.154178) |
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ste (0.135208) |
|
eje (0.0988338) |
