Non-Coding RNA Search

Ss1.1-Pig3-SRG8009O13.5

Sequence:


               
               TTTGAGGTTTCAGTTGAGGCGATTTTTCTTCCCCCTTAAGTAGCCGTCATCATTACTTTC
AAAATTGACTAAACTGTAGTGACGGGGGAAACTCTTGGGTTCACAAACCCTGTCCTGCAG
TGTCAAGGTCAGCCTTGACCCCCAGGTTTGGGATGTTCTGAGCCAATGGAAACTTGCTTC
TCTGTTTCCTCTGGCGGCTGTTTCTTATCCAAGGAGTTCAAGTTCTCCAGTTTCCTTTGG
CTGTGTAAACCCCCCCCCCCCAACATGCTAACAGTGGATAAAATGAAGAGTTCTCAGATG
TAGAGAATTCTTTACATGTAAACACCAGCTTCATGAACACTTTTGAGGAGGAGGTAGGCA
GATAAGGTGGATTTCTGAGGGCTAGGTGTTATGTCTACAGAAGTGAATAAAGCAGCCCCT
GGTTATATAGAGACATAGTGTATAGGTTGATTAAAGCAACGATGAAGTGTCTTCTGTCTG
TTCTACTAGACTCAGGTCGTGAGTGGGGAGGGAAGATAAATGTTTCTAACTTAACATCAT
TAGGCTAATTACCATTCTTAAACTTTATCGTAGAAACTTTCAAACAGGAACAAAAGAAGA
GAGAGGGTAATGAATGCAGCCCCATGTGCCCACAATCCAGCCCCCATACAACTGTCCACA
TCTGCCAGTCCTGTCTCATCTATTACCCCAAACTGGCTGGATGATTGTAAAGCAAAACCC
ATATCATTTCATCTGTAAAGACGTCAGCATATATCTCGAAAAGCTAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTGAGGTTTCAGTTGAGGCGATTTTTCTTCCCCCTTAAGTAGCCGTCATCATTACTTTC
AAAATTGACTAAACTGTAGTGACGGGGGAAACTCTTGGGTTCACAAACCCTGTCCTGCAG
TGTCAAGGTCAGCCTTGACCCCCAGGTTTGGGATGTTCTGAGCCAATGGAAACTTGCTTC
TCTGTTTCCTCTGGCGGCTGTTTCTTATCCAAGGAGTTCAAGTTCTCCAGTTTCCTTTGG
CTGTGTAAACCCCCCCCCCCCAACATGCTAACAGTGGATAAAATGAAGAGTTCTCAGATG
TAGAGAATTCTTTACATGTAAACACCAGCTTCATGAACACTTTTGAGGAGGAGGTAGGCA
GATAAGGTGGATTTCTGAGGGCTAGGTGTTATGTCTACAGAAGTGAATAAAGCAGCCCCT
GGTTATATAGAGACATAGTGTATAGGTTGATTAAAGCAACGATGAAGTGTCTTCTGTCTG
TTCTACTAGACTCAGGTCGTGAGTGGGGAGGGAAGATAAATGTTTCTAACTTAACATCAT
TAGGCTAATTACCATTCTTAAACTTTATCGTAGAAACTTTCAAACAGGAACAAAAGAAGA
GAGAGGGTAATGAATGCAGCCCCATGTGCCCACAATCCAGCCCCCATACAACTGTCCACA
TCTGCCAGTCCTGTCTCATCTATTACCCCAAACTGGCTGGATGATTGTAAAGCAAAACCC
ATATCATTTCATCTGTAAAGACGTCAGCATATATCTCGAAAAGCTAAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-768, gnl|bosTau2|chrX (1305469-1304709)
               

               
               1-768, gnl|Hg17|chrX (118540904-118539194)
               

               
               1-768, gnl|Mm7|chrX (31679822-31678583)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-768, gnl|bosTau2|chrX (1305469-1304709)
               

               
               1-768, gnl|Hg17|chrX (118540904-118539194)
               

               
               1-768, gnl|Mm7|chrX (31679822-31678583)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               med (0.116252)
               

               
               cbl (0.114797)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)
               

               
               cbl (0.114797)

	1-768, gnl\|bosTau2\|chrX (1305469-1304709)
	1-768, gnl\|Hg17\|chrX (118540904-118539194)
	1-768, gnl\|Mm7\|chrX (31679822-31678583)