Non-Coding RNA Search

Ss1.1-Pig3-SRG8010A22.5

Sequence:


               
               GAATAAGAGCCTGCTGTGGAAAAGCCCAAAGAACCCAAAGTTGAAGCCAAGAAGGAAGAG
GCTGAAGGTAAGAAAAAAGCAACCACCCCATAGAAGGAGGCTCCTGCCAAGGGGAAGGAG
GAGGCCAAACCCAAAGAGAAGACTGAGGTGTCCAAGAAGGAGCCAGATGACGCCAAGGCC
AAAGAACCCAGCAAAGCAGCAGAGAAAGAGCCAGAAAAGCCAAAGAAGGAAGAGACACCG
GCAGCACCTGAGAAAAAAGACACCAAGGAGGCCAAGAAGCCTGAGGAGAAACCCAAAACA
GAGGCCCAAGCCAAGGAGGAGCCCAGCAAGGAGGGCAAAGCCAAGGCAGAAAAGGCTGAG
AAATCCTCTAGCACAGACCAGAAAGACAGCAGGCCTCCAGAGAAGGCCACAGAAGACAAG
GCCACCAAGGGGGAGAAGTAAGGCAAAGAGAAGGGAACATCTATAGCAGCCAAAGAAACT
CAGGAGGGTCTGGGAGCTCATGGGTCAGTGTAATGAATTTTCATTTTTCCTCCCTTTGCG
TTAAGAAACTCTGCTTAGGTGACGGGCCCTTCTTCACTAAACAGGAATTTCTATTAGCAA
TATGTTAGCAAGAGAGGGTGTTCATAATCCATGGCCCCACACCCCAACCCTCCATAGGCG
ACGGACAATTATGTTATGATAGCTTACGTAGCCGAATGTGATACTTGCCGAATGCCACAT
GTAAACACTTGATTATAAAAACTGCCCCCCTCCTCTCCAAATAAGTGCATTTATTTCCTG
TATGTGCAATTGACAGATGACGCAATAATGAATGAGCAGTTAGAAACACATTATGCTTGA
GATGTCTTAACCTATTCCTGAACGCCCTCTGTTTTCCAAAGGAGTGGTCAAGCCCTTGTC
CAAAGCTCTCAATCCTGGAAGAGCTGGAGCAGGTGGGGCTGGGCGCTGGCCAATGAACCA
CGCCAGGGCGCACTTTTCCACTGAAGTCCACTTTCAATTGCTTATGTGCAATAAACCCAA
GTGCTTATAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAATAAGAGCCTGCTGTGGAAAAGCCCAAAGAACCCAAAGTTGAAGCCAAGAAGGAAGAG
GCTGAAGGTAAGAAAAAAGCAACCACCCCATAGAAGGAGGCTCCTGCCAAGGGGAAGGAG
GAGGCCAAACCCAAAGAGAAGACTGAGGTGTCCAAGAAGGAGCCAGATGACGCCAAGGCC
AAAGAACCCAGCAAAGCAGCAGAGAAAGAGCCAGAAAAGCCAAAGAAGGAAGAGACACCG
GCAGCACCTGAGAAAAAAGACACCAAGGAGGCCAAGAAGCCTGAGGAGAAACCCAAAACA
GAGGCCCAAGCCAAGGAGGAGCCCAGCAAGGAGGGCAAAGCCAAGGCAGAAAAGGCTGAG
AAATCCTCTAGCACAGACCAGAAAGACAGCAGGCCTCCAGAGAAGGCCACAGAAGACAAG
GCCACCAAGGGGGAGAAGTAAGGCAAAGAGAAGGGAACATCTATAGCAGCCAAAGAAACT
CAGGAGGGTCTGGGAGCTCATGGGTCAGTGTAATGAATTTTCATTTTTCCTCCCTTTGCG
TTAAGAAACTCTGCTTAGGTGACGGGCCCTTCTTCACTAAACAGGAATTTCTATTAGCAA
TATGTTAGCAAGAGAGGGTGTTCATAATCCATGGCCCCACACCCCAACCCTCCATAGGCG
ACGGACAATTATGTTATGATAGCTTACGTAGCCGAATGTGATACTTGCCGAATGCCACAT
GTAAACACTTGATTATAAAAACTGCCCCCCTCCTCTCCAAATAAGTGCATTTATTTCCTG
TATGTGCAATTGACAGATGACGCAATAATGAATGAGCAGTTAGAAACACATTATGCTTGA
GATGTCTTAACCTATTCCTGAACGCCCTCTGTTTTCCAAAGGAGTGGTCAAGCCCTTGTC
CAAAGCTCTCAATCCTGGAAGAGCTGGAGCAGGTGGGGCTGGGCGCTGGCCAATGAACCA
CGCCAGGGCGCACTTTTCCACTGAAGTCCACTTTCAATTGCTTATGTGCAATAAACCCAA
GTGCTTATAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-1032, gnl|bosTau2|chr17 (39448012-39449052)
               

               
               1-1032, gnl|Hg17|chr22 (28210811-28211827)
               

               
               1-1032, gnl|Mm7|chr11 (4891816-4890762)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-1032, gnl|bosTau2|chr17 (39448012-39449052)
               

               
               1-1032, gnl|Hg17|chr22 (28210811-28211827)
               

               
               1-1032, gnl|Mm7|chr11 (4891816-4890762)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fhi (0.169578)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.169578)

	1-1032, gnl\|bosTau2\|chr17 (39448012-39449052)
	1-1032, gnl\|Hg17\|chr22 (28210811-28211827)
	1-1032, gnl\|Mm7\|chr11 (4891816-4890762)