Non-Coding RNA Search

Ss1.1-Pig3-SRG8010I14.5

Sequence:


               
               TCCAATTACATGATAAATAATGTCCCTGGTTAAAGGAGGTTGAGGGTAGTGGGGGGGTGG
TGGTACGGGGAGTGAGAGATAGGAGGTACTCTTGAAGTCACTTGGTTCAGGATGACCTTG
AGGATAAACTTGGTACCTGATATTTCAGGGTGACTTGTCAGGATGCATCTGGTCTCAAAC
TCAAGTGCCTTTAGAGGCCAGCCACAGAGCCTTTGTACGTTATATGCTGAGGAAAGAGGG
GAGGGGAGGGAGAATGGAAGTGAGCTGGCTGTTGCCTACTTTGCCTAAGGGCTTTCAGTT
TAAACAAAACAAACTGAACAACCCTGTTAGCCAAGCAAAACTTTAGTAGAGCTGTGTTCT
GTCTGTGGGTACTTCCTGACAGTTTACATTGTTCACCTTATTATTTAGAAGCAGCTTCAT
TTTTCTCTAAGAGATTGTTAGAAGCCTGTTCTTAGAAAAGGAGTGTATTTCACACTTTTT
CTTTTACAACCTAGAACTTTTAATCCAGTATTAATTTACCTGGAAGGTATCTTTCTTTCT
AGATTTTCCCTCCTCCATCAGATAGAGTACATTGTTTGGCTGCTTCTTTACATTTTGTGC
AACTTCCTTTTAATATTTTAAATTTAGTTAGCATTTAAATTTGTTAACAAGAAATGCCAT
ATATATATATATGTATATATATTTTTTGTACAATTTAGGGAAGAAAATAAAACCAAAAAA
GAAAGTCAAGTGCTTACCACTCATTTCCTTTGTGTAACCTCTTTTGTATCCCCTTCTCTC
TGCATCAGAAGCAATATATCTATCCTGCTTTTTTTTTTGCTATTCATTCCCTTATCTTTA
TAATTATAACCTCACTGAATGCATTACTAAGTAATCTAAATAGTATGTGGTCAGTATTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCAATTACATGATAAATAATGTCCCTGGTTAAAGGAGGTTGAGGGTAGTGGGGGGGTGG
TGGTACGGGGAGTGAGAGATAGGAGGTACTCTTGAAGTCACTTGGTTCAGGATGACCTTG
AGGATAAACTTGGTACCTGATATTTCAGGGTGACTTGTCAGGATGCATCTGGTCTCAAAC
TCAAGTGCCTTTAGAGGCCAGCCACAGAGCCTTTGTACGTTATATGCTGAGGAAAGAGGG
GAGGGGAGGGAGAATGGAAGTGAGCTGGCTGTTGCCTACTTTGCCTAAGGGCTTTCAGTT
TAAACAAAACAAACTGAACAACCCTGTTAGCCAAGCAAAACTTTAGTAGAGCTGTGTTCT
GTCTGTGGGTACTTCCTGACAGTTTACATTGTTCACCTTATTATTTAGAAGCAGCTTCAT
TTTTCTCTAAGAGATTGTTAGAAGCCTGTTCTTAGAAAAGGAGTGTATTTCACACTTTTT
CTTTTACAACCTAGAACTTTTAATCCAGTATTAATTTACCTGGAAGGTATCTTTCTTTCT
AGATTTTCCCTCCTCCATCAGATAGAGTACATTGTTTGGCTGCTTCTTTACATTTTGTGC
AACTTCCTTTTAATATTTTAAATTTAGTTAGCATTTAAATTTGTTAACAAGAAATGCCAT
ATATATATATATGTATATATATTTTTTGTACAATTTAGGGAAGAAAATAAAACCAAAAAA
GAAAGTCAAGTGCTTACCACTCATTTCCTTTGTGTAACCTCTTTTGTATCCCCTTCTCTC
TGCATCAGAAGCAATATATCTATCCTGCTTTTTTTTTTGCTATTCATTCCCTTATCTTTA
TAATTATAACCTCACTGAATGCATTACTAAGTAATCTAAATAGTATGTGGTCAGTATTGC

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               1-628, gnl|bosTau2|chr15 (24487774-24488420)
               

               
               1-628, gnl|Hg17|chr11 (14627694-14628320)
               

               
               1-628, gnl|Mm7|chr7 (110336921-110337577)
               


               
               630-859, gnl|bosTau2|chr15 (24488522-24488764)
               

               
               630-859, gnl|Mm7|chr7 (110337584-110337798)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-628, gnl|bosTau2|chr15 (24487774-24488420)
               

               
               1-628, gnl|Hg17|chr11 (14627694-14628320)
               

               
               1-628, gnl|Mm7|chr7 (110336921-110337577)
               


               
               630-859, gnl|bosTau2|chr15 (24488522-24488764)
               

               
               630-859, gnl|Mm7|chr7 (110337584-110337798)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cbl (0.229595)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.229595)

	1-628, gnl\|bosTau2\|chr15 (24487774-24488420)
	1-628, gnl\|Hg17\|chr11 (14627694-14628320)
	1-628, gnl\|Mm7\|chr7 (110336921-110337577)

	630-859, gnl\|bosTau2\|chr15 (24488522-24488764)
	630-859, gnl\|Mm7\|chr7 (110337584-110337798)