Non-Coding RNA Search

Ss1.1-Pig3-SRG8010J08.3

Sequence:


               
               GGCTGACGGAGACACGACATGTTTCACGACGTAGGCAAGGTAATTGGAACTTTGGAGGCT
CCAGCGTTGGCACATCATGCTCTAACCTGGAAGTGGCCCCTGTTGCTTCCACTCTTAATC
TCGTTGGCCACCTACTGACATGTGCACCTGACTACAAGGGGCTAGCGAGTTGAAGATACT
GTGTGCCCTGGAGGAGAGGAGAAGGCAACACTCGTGATGACTGCACCTCTGGTTCACAGG
CCAGGATAACATCTCACACTCTGAAGGCCCTTCTAACTTGTTACCCAGCTGGCTATATAT
CTAGAGAGAAACTCTTCCTAAATTTCTCCACCGTGCACCATTCCAGTGCATATTCAAGCA
AAATAGCCCAATAACAGTCCAAGAACTGCCTGCAAGAATAAAGAAAATTTTTGCATTGTT
AACTCATGGCTAAAGTCAAGGCCTTTCCCCACACTCGTCCTGCTTCAACTAATGACTGAA
CGAACTTTATTTAATTATTAATATGTAAACCACTTATTCATCTGTTCATTGAGCACTTGC
AATATGTAAGGTGTGGTCCTTGTTGCAAAAAGGTACACTGCGGTAATATATAGTCTAGGA
AAGGGGGCAGACGTTAAGCTGGATAATGCTGAGAAAATATTAACAACTCAAATCTTAAAT
TATTGGTTTCTAATATGTGTGCTTGGCTAGCAGATTGGATGTGAGGGATACGTATCTCAG
CATATGCACCTTGAGATTTGAGCTGCTCAACCTTACAACAACCCCAAGTGGTGGCATTTG
CTACACAAATTTCTGTCATTAACCCATACACAATGATGAACAAATAAAGGAGGAATGTCA
TGTTAACTATGGATACTATTCAGCCATAAAACAAATTAAATAATCCATTTACAGCAACAT
GCATGGACCTGGAGGTTATCATACTAAGTGAGGTAGGTCAGATAAGGACAAATACCATAT
GATGTCACTTACATGTGGAATCTAAGAAAATGATACAAGTGAACTTATTTGCAAAACAGA
AATAGACTCACAGACATAGAACACAAATGGATGGTTACCAAAGGCAAAAGAGAAGAGAGG
GAGAAATATGGAATTTGGGATTAACAGTATATATTATACTATATACAAAACAGATAAACA
ACAAGGACCTACTGTATAGCACAGAGAACTATATCCATAATTTTGTAATAACCCATAATG
GAAAAGAATGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTGACGGAGACACGACATGTTTCACGACGTAGGCAAGGTAATTGGAACTTTGGAGGCT
CCAGCGTTGGCACATCATGCTCTAACCTGGAAGTGGCCCCTGTTGCTTCCACTCTTAATC
TCGTTGGCCACCTACTGACATGTGCACCTGACTACAAGGGGCTAGCGAGTTGAAGATACT
GTGTGCCCTGGAGGAGAGGAGAAGGCAACACTCGTGATGACTGCACCTCTGGTTCACAGG
CCAGGATAACATCTCACACTCTGAAGGCCCTTCTAACTTGTTACCCAGCTGGCTATATAT
CTAGAGAGAAACTCTTCCTAAATTTCTCCACCGTGCACCATTCCAGTGCATATTCAAGCA
AAATAGCCCAATAACAGTCCAAGAACTGCCTGCAAGAATAAAGAAAATTTTTGCATTGTT
AACTCATGGCTAAAGTCAAGGCCTTTCCCCACACTCGTCCTGCTTCAACTAATGACTGAA
CGAACTTTATTTAATTATTAATATGTAAACCACTTATTCATCTGTTCATTGAGCACTTGC
AATATGTAAGGTGTGGTCCTTGTTGCAAAAAGGTACACTGCGGTAATATATAGTCTAGGA
AAGGGGGCAGACGTTAAGCTGGATAATGCTGAGAAAATATTAACAACTCAAATCTTAAAT
TATTGGTTTCTAATATGTGTGCTTGGCTAGCAGATTGGATGTGAGGGATACGTATCTCAG
CATATGCACCTTGAGATTTGAGCTGCTCAACCTTACAACAACCCCAAGTGGTGGCATTTG
CTACACAAATTTCTGTCATTAACCCATACACAATGATGAACAAATAAAGGAGGAATGTCA
TGTTAACTATGGATACTATTCAGCCATAAAACAAATTAAATAATCCATTTACAGCAACAT
GCATGGACCTGGAGGTTATCATACTAAGTGAGGTAGGTCAGATAAGGACAAATACCATAT
GATGTCACTTACATGTGGAATCTAAGAAAATGATACAAGTGAACTTATTTGCAAAACAGA
AATAGACTCACAGACATAGAACACAAATGGATGGTTACCAAAGGCAAAAGAGAAGAGAGG
GAGAAATATGGAATTTGGGATTAACAGTATATATTATACTATATACAAAACAGATAAACA
ACAAGGACCTACTGTATAGCACAGAGAACTATATCCATAATTTTGTAATAACCCATAATG
GAAAAGAATGGG

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               793-1164, gnl|bosTau2|chr1 (1991732-1991352)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               793-1164, gnl|bosTau2|chr1 (1991732-1991352)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               rec (0.17307)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               rec (0.17307)