Non-Coding RNA Search

Ss1.1-Pig3-SRG8010K08.3

Sequence:


               
               TTGTTGATATATTCAGTAAAGGCTTATTTTAAAAAGAAACCACATTGTGTTTATCTGAGT
AAGTTCCTTGGGACACTGCCAATCCTTGTTTTGTTCATGTCAAAGCGAAATGAGGGCCGT
TTCCTGATGGAGGACGATGGTAAGAATGAAGGAGGTAATGGGATTTTTCATTTTCTCTTA
CCTGGGAGATGACGTCTGTGTTTTAAAGCCATTGGACCCTTTTTGTGGGAAGGGTTTATA
TGAAATCTTCATGTTCTTTTCTATTTCCTGACTCAATTGTGTGTTCCTGAATATCTTTTG
AATATGCACACATACATTGAGCATATTATTTTGTGTTTGTGAAACCTGTGTTGTTTAGAA
TATAGATAAATATCAATGTAGTTATCTCATCAGAATAATGTTTTTCCCTATTTCATAATA
TAAATTCTTGGCTTTAAATGTCAATTTTCCTTAAGAATTCTCATGGTACTTTCTATTTCA
GAATTGTTTATAGCTCACCCACTCATACTTTCAATGAGCACTCATGATAATGTATTTATT
CATATGCTCAAGTTCAACTTGAGATTAACCTCCTGATTTTCCAGAACCCCTTTCTCTAAC
TCCTCTTGGCCATTTCACTTACAATGTATTTGACAGAAACTGAATCAGGAAATAAAATCA
TGACACTTCAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGTTGATATATTCAGTAAAGGCTTATTTTAAAAAGAAACCACATTGTGTTTATCTGAGT
AAGTTCCTTGGGACACTGCCAATCCTTGTTTTGTTCATGTCAAAGCGAAATGAGGGCCGT
TTCCTGATGGAGGACGATGGTAAGAATGAAGGAGGTAATGGGATTTTTCATTTTCTCTTA
CCTGGGAGATGACGTCTGTGTTTTAAAGCCATTGGACCCTTTTTGTGGGAAGGGTTTATA
TGAAATCTTCATGTTCTTTTCTATTTCCTGACTCAATTGTGTGTTCCTGAATATCTTTTG
AATATGCACACATACATTGAGCATATTATTTTGTGTTTGTGAAACCTGTGTTGTTTAGAA
TATAGATAAATATCAATGTAGTTATCTCATCAGAATAATGTTTTTCCCTATTTCATAATA
TAAATTCTTGGCTTTAAATGTCAATTTTCCTTAAGAATTCTCATGGTACTTTCTATTTCA
GAATTGTTTATAGCTCACCCACTCATACTTTCAATGAGCACTCATGATAATGTATTTATT
CATATGCTCAAGTTCAACTTGAGATTAACCTCCTGATTTTCCAGAACCCCTTTCTCTAAC
TCCTCTTGGCCATTTCACTTACAATGTATTTGACAGAAACTGAATCAGGAAATAAAATCA
TGACACTTCAGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-668, gnl|bosTau2|chr10 (65398029-65397364)
               

               
               1-668, gnl|Hg17|chr14 (85163982-85164780)
               

               
               1-668, gnl|Mm7|chr12 (93262721-93263356)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-668, gnl|bosTau2|chr10 (65398029-65397364)
               

               
               1-668, gnl|Hg17|chr14 (85163982-85164780)
               

               
               1-668, gnl|Mm7|chr12 (93262721-93263356)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cbe (0.239234)
               

               
               eye (0.170503)
               

               
               tra (0.123092)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.239234)
               

               
               eye (0.170503)
               

               
               tra (0.123092)

	1-668, gnl\|bosTau2\|chr10 (65398029-65397364)
	1-668, gnl\|Hg17\|chr14 (85163982-85164780)
	1-668, gnl\|Mm7\|chr12 (93262721-93263356)