Non-Coding RNA Search

Ss1.1-Pig3-SRG8010N01.5

Sequence:


               
               CAGACTGTATGACTGGAGAAGCTCAAGTAAGACCTCAGAGGGGAACCCACCCACACGCTC
TATGACATAACAGGTGGCACCAGCAATCCGGGCTCACGGCAGCCTCTCCAGTGACTATAT
GTGTTCCTGGAGATGCACTTTGTATTGAGCTAATCAGCAAAGCAGCGGCAGGTGCCACAT
GCCGAGTAGGGCGACCAGTGCGTGGTCACTGAGGAAGTACTCTTTTTCTCTTGAGAAAGT
ATTTTTTTTTCTCCTAAAAGTGCCTTTTAATTGACCACTGTCATAGCCACTTTCCTGCTC
AAGCATCCAAGACACTCCCCTCACCCACAGATTCCAAGTCACATACGGTGGTTCCCGGTG
CTTGTGTTTTGTGAATAAAAGGAAAAAGTCAAACATCACTGATGTCTCATTTCACTGAGA
TATTTTTGTTTAAAGAGAGTTAGAAGCAGAAAAGGATCTTCCTATTTTGCACTTCTAGCA
TTTATATAGTTTTATGATTATAAAAGTAATATATATACCTTTACATGCATAAAGCAAACC
TCTGGAAGGAAATGTACCCACATGTTAACAGAGGTTATTTTGGAAGGTAGAGTACATAGA
ATTTTGCTGGGTTTTTTACAGTTTTATATTGCTGTCTTTTAAAAATGTGTGTGTATATAC
ATGTATGTGTACTACTTTTGCAGTAGTAAAACTGATTTACATAATAATAATCAGTAAAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGACTGTATGACTGGAGAAGCTCAAGTAAGACCTCAGAGGGGAACCCACCCACACGCTC
TATGACATAACAGGTGGCACCAGCAATCCGGGCTCACGGCAGCCTCTCCAGTGACTATAT
GTGTTCCTGGAGATGCACTTTGTATTGAGCTAATCAGCAAAGCAGCGGCAGGTGCCACAT
GCCGAGTAGGGCGACCAGTGCGTGGTCACTGAGGAAGTACTCTTTTTCTCTTGAGAAAGT
ATTTTTTTTTCTCCTAAAAGTGCCTTTTAATTGACCACTGTCATAGCCACTTTCCTGCTC
AAGCATCCAAGACACTCCCCTCACCCACAGATTCCAAGTCACATACGGTGGTTCCCGGTG
CTTGTGTTTTGTGAATAAAAGGAAAAAGTCAAACATCACTGATGTCTCATTTCACTGAGA
TATTTTTGTTTAAAGAGAGTTAGAAGCAGAAAAGGATCTTCCTATTTTGCACTTCTAGCA
TTTATATAGTTTTATGATTATAAAAGTAATATATATACCTTTACATGCATAAAGCAAACC
TCTGGAAGGAAATGTACCCACATGTTAACAGAGGTTATTTTGGAAGGTAGAGTACATAGA
ATTTTGCTGGGTTTTTTACAGTTTTATATTGCTGTCTTTTAAAAATGTGTGTGTATATAC
ATGTATGTGTACTACTTTTGCAGTAGTAAAACTGATTTACATAATAATAATCAGTAAAAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-708, gnl|bosTau2|chr21 (31112590-31113269)
               

               
               6-708, gnl|Hg17|chr2 (227686343-227687046)
               

               
               6-708, gnl|Mm7|chr1 (82652229-82652902)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-708, gnl|bosTau2|chr21 (31112590-31113269)
               

               
               6-708, gnl|Hg17|chr2 (227686343-227687046)
               

               
               6-708, gnl|Mm7|chr1 (82652229-82652902)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fco (0.157208)
               

               
               lun (0.150489)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)
               

               
               lun (0.150489)

	6-708, gnl\|bosTau2\|chr21 (31112590-31113269)
	6-708, gnl\|Hg17\|chr2 (227686343-227687046)
	6-708, gnl\|Mm7\|chr1 (82652229-82652902)