Non-Coding RNA Search

Ss1.1-Pig3-SRG8010N20.5

Sequence:


               
               CCAAAGGGCTGTCGCCAGAGCTGATACACTGGCACAGGGCTGCTGGGTGGCTGCTGTAAC
ATTTCTGGAGGCCCCAGCGAGATTCCAACCGTTCAGGCCCCTTGAGCCACCGGAACAGAG
GCAAGGCCTCCCCGGGAGCCGGGGAGCCTCGAACTGAACAAGGCGGTGTGCCACCCAACG
GTATTCAGGGTCCTCCTTTGTGAACGGCATTCATGACTCCCGGGTGACCAAACCCCGACT
GGACTCAGTGGAGAGATGGACCTACTCACCAGGAAGGCATCCGGACAAGGCAGAAGAAAT
GGTACCAGATGGAACCATGGGTTACACAAAGGAATGAAGAGCACCAGAAATGGAAATGGT
ACCTATGTAGATTCTCTTCTTGACCAAAATGAGTAGCTGATGTCCTGACTGAGATAGAGG
TGAACCAGAATTTCACTAGATAAATGATCCACGGAAATCAGACTACTGCCTCTGATCCTG
TGTGAAAACCATTAGGCAAATACCTTCCCTACCTATGCCAATCCCAAACTCCCAGTCCAT
CCTTCCCTCCCACCTGTCCCCTTTGGTAACCATAAGTTTGTTTTCAAAGTCTGTGAGTCT
CTTTCTGTTCTGCAAATAAGTTCATTTGTATCCTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCAAAGGGCTGTCGCCAGAGCTGATACACTGGCACAGGGCTGCTGGGTGGCTGCTGTAAC
ATTTCTGGAGGCCCCAGCGAGATTCCAACCGTTCAGGCCCCTTGAGCCACCGGAACAGAG
GCAAGGCCTCCCCGGGAGCCGGGGAGCCTCGAACTGAACAAGGCGGTGTGCCACCCAACG
GTATTCAGGGTCCTCCTTTGTGAACGGCATTCATGACTCCCGGGTGACCAAACCCCGACT
GGACTCAGTGGAGAGATGGACCTACTCACCAGGAAGGCATCCGGACAAGGCAGAAGAAAT
GGTACCAGATGGAACCATGGGTTACACAAAGGAATGAAGAGCACCAGAAATGGAAATGGT
ACCTATGTAGATTCTCTTCTTGACCAAAATGAGTAGCTGATGTCCTGACTGAGATAGAGG
TGAACCAGAATTTCACTAGATAAATGATCCACGGAAATCAGACTACTGCCTCTGATCCTG
TGTGAAAACCATTAGGCAAATACCTTCCCTACCTATGCCAATCCCAAACTCCCAGTCCAT
CCTTCCCTCCCACCTGTCCCCTTTGGTAACCATAAGTTTGTTTTCAAAGTCTGTGAGTCT
CTTTCTGTTCTGCAAATAAGTTCATTTGTATCCTTT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               41-290, gnl|bosTau2|chr16 (13881383-13881135)
               

               
               41-290, gnl|Mm7|chr14 (29906567-29906339)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               41-290, gnl|bosTau2|chr16 (13881383-13881135)
               

               
               41-290, gnl|Mm7|chr14 (29906567-29906339)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cmu (0.186393)
               

               
               che (0.136314)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cmu (0.186393)
               

               
               che (0.136314)

	41-290, gnl\|bosTau2\|chr16 (13881383-13881135)
	41-290, gnl\|Mm7\|chr14 (29906567-29906339)