Ss1.1-Pig3-SRG8010O15.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CATGACATTTGCCCATGGAGGAAGGTCATACAACATCACTAGGAATATCAAACTCCGTAT CAAAAAAAAAGAAGAGGAGACAATTCCCGTGATTATCTCCCCGCGCCAGACCATATCTGC TTCACTGGGCTCGAGACTGACGATCCCATGTAAGGTGTTTCTGGGAGCTGGGATCCCCAC GACCACTGTGCTATGGTGGATGGCCAACAACACTCACATAGATGATGCCTACCAGGGAGG CCGCGTGACTGAGGGGCAGCGCCAGGAATACTCAGAAAATAATGAGAACTACATTGAAGT GCCACTGATTTTTGAAAGAGTCATAAGAGAGGATTTGCATACGGATTTTAAATGTGTTGT CATTAATACCATGAGTTTCCAGACGCTTCGTACCACAGTCAAAGAAGCTGCCTCGTTCTC CTGGGGGATTGCGCTGGCCCCCCTCTCCCTCATCATCCTGGTTTTGGGAGGAATATGGAT ACACAGACGGTGTAAACGGAGAACTGGAAAAACCTATGGTTTAATAGAGTTAAAGACTGG CCACCAACATTCCTAGTCCTGTCCCAGTAAAATAAAGGAAGTTAAATAATTCCAATCCAG TGATGTCCTTTCTAATGGAAGCAGCTCTGGCTTGTGAAGGATACTGTTCTTTTCCTCAGT TGTTTAACATAGCTGCTCTGTTTATAGTGGGTTTGTAATAAAAGATTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CATGACATTTGCCCATGGAGGAAGGTCATACAACATCACTAGGAATATCAAACTCCGTAT CAAAAAAAAAGAAGAGGAGACAATTCCCGTGATTATCTCCCCGCGCCAGACCATATCTGC TTCACTGGGCTCGAGACTGACGATCCCATGTAAGGTGTTTCTGGGAGCTGGGATCCCCAC GACCACTGTGCTATGGTGGATGGCCAACAACACTCACATAGATGATGCCTACCAGGGAGG CCGCGTGACTGAGGGGCAGCGCCAGGAATACTCAGAAAATAATGAGAACTACATTGAAGT GCCACTGATTTTTGAAAGAGTCATAAGAGAGGATTTGCATACGGATTTTAAATGTGTTGT CATTAATACCATGAGTTTCCAGACGCTTCGTACCACAGTCAAAGAAGCTGCCTCGTTCTC CTGGGGGATTGCGCTGGCCCCCCTCTCCCTCATCATCCTGGTTTTGGGAGGAATATGGAT ACACAGACGGTGTAAACGGAGAACTGGAAAAACCTATGGTTTAATAGAGTTAAAGACTGG CCACCAACATTCCTAGTCCTGTCCCAGTAAAATAAAGGAAGTTAAATAATTCCAATCCAG TGATGTCCTTTCTAATGGAAGCAGCTCTGGCTTGTGAAGGATACTGTTCTTTTCCTCAGT TGTTTAACATAGCTGCTCTGTTTATAGTGGGTTTGTAATAAAAGATTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 118-268, gnl|bosTau2|chr11 (3719153-3719003) | |
| 118-268, gnl|canFam2|chr10 (44096056-44095877) | |
| 118-268, gnl|dasNov1|scaffold_11692 (36227-36048) | |
| 118-268, gnl|echTel1|scaffold_322464 (154600-154430) | |
| 118-268, gnl|hg17|chr2 (102099476-102099654) | |
| 118-268, gnl|Hg17|chr2 (102099501-102099652) | |
| 118-268, gnl|loxAfr1|scaffold_2448 (60946-61123) | |
| 118-268, gnl|mm7|chr1 (40359940-40360120) | |
| 118-268, gnl|Mm7|chr1 (40359967-40360118) | |
| 118-268, gnl|monDom2|scaffold_11 (20132741-20132947) | |
| 118-268, gnl|oryCun1|scaffold_110129 (15929-15744) | |
| 118-268, gnl|panTro1|chr12 (104995330-104995508) | |
| 118-268, gnl|rheMac2|chr13 (101962984-101963162) | |
| 118-268, gnl|rn3|chr9 (39316108-39316288) | |
| 406-708, gnl|bosTau2|chr11 (3713949-3713647) | |
| 406-708, gnl|canFam2|chr10 (44092026-44091707) | |
| 406-708, gnl|dasNov1|scaffold_11692 (33425-33130) | |
| 406-708, gnl|echTel1|scaffold_263141 (2731-3033) | |
| 406-708, gnl|hg17|chr2 (102103104-102103428) | |
| 406-708, gnl|Hg17|chr2 (102103204-102103516) | |
| 406-708, gnl|loxAfr1|scaffold_2448 (65241-65553) | |
| 406-708, gnl|mm7|chr1 (40364019-40364353) | |
| 406-708, gnl|Mm7|chr1 (40364109-40364430) | |
| 406-708, gnl|monDom2|scaffold_11 (20139440-20139744) | |
| 406-708, gnl|oryCun1|scaffold_110129 (13353-13037) | |
| 406-708, gnl|panTro1|chr12 (104998959-104999283) | |
| 406-708, gnl|rheMac2|chr13 (101966597-101966933) | |
| 406-708, gnl|rn3|chr9 (39320815-39321116) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 118-268, gnl|bosTau2|chr11 (3719153-3719003) | |
| 118-268, gnl|canFam2|chr10 (44096056-44095877) | |
| 118-268, gnl|dasNov1|scaffold_11692 (36227-36048) | |
| 118-268, gnl|echTel1|scaffold_322464 (154600-154430) | |
| 118-268, gnl|hg17|chr2 (102099476-102099654) | |
| 118-268, gnl|Hg17|chr2 (102099501-102099652) | |
| 118-268, gnl|loxAfr1|scaffold_2448 (60946-61123) | |
| 118-268, gnl|mm7|chr1 (40359940-40360120) | |
| 118-268, gnl|Mm7|chr1 (40359967-40360118) | |
| 118-268, gnl|monDom2|scaffold_11 (20132741-20132947) | |
| 118-268, gnl|oryCun1|scaffold_110129 (15929-15744) | |
| 118-268, gnl|panTro1|chr12 (104995330-104995508) | |
| 118-268, gnl|rheMac2|chr13 (101962984-101963162) | |
| 118-268, gnl|rn3|chr9 (39316108-39316288) | |
| 406-708, gnl|bosTau2|chr11 (3713949-3713647) | |
| 406-708, gnl|canFam2|chr10 (44092026-44091707) | |
| 406-708, gnl|dasNov1|scaffold_11692 (33425-33130) | |
| 406-708, gnl|echTel1|scaffold_263141 (2731-3033) | |
| 406-708, gnl|hg17|chr2 (102103104-102103428) | |
| 406-708, gnl|Hg17|chr2 (102103204-102103516) | |
| 406-708, gnl|loxAfr1|scaffold_2448 (65241-65553) | |
| 406-708, gnl|mm7|chr1 (40364019-40364353) | |
| 406-708, gnl|Mm7|chr1 (40364109-40364430) | |
| 406-708, gnl|monDom2|scaffold_11 (20139440-20139744) | |
| 406-708, gnl|oryCun1|scaffold_110129 (13353-13037) | |
| 406-708, gnl|panTro1|chr12 (104998959-104999283) | |
| 406-708, gnl|rheMac2|chr13 (101966597-101966933) | |
| 406-708, gnl|rn3|chr9 (39320815-39321116) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ski (0.146735) | |
| cov (0.132153) |