Ss1.1-Pig3-SRG8011A08.5
|
TGCGCTGGGCATCGGCGTTTACCCGGTGCGCATGGTGGTCAGGGGCGACCACACCTACGC
CGAGTGCTGCCTGACGGTGGTGGCCTGTGGCACTGAGGCCGTGGTCTTCAGCATCGACGG
CTCCTTCACGGCCAGCGTCTCCATCATGGGCAGCGACCCCAAGGTGCGCGCCGGCGCTGT
GGACGTGGTCAGGCATTGGCAGGACGCGGGGTACCTGATCGTGTACGTAACGGGCCGGCC
TGATATGCAGAAGCACCGCGTGGTGGCCTGGCTGTCGCAGCACAACTTTCCCCACGGCGT
CGTCTCCTTCTGCGACGGCCTCACCCACGACCCGCTGCGCCAGAAGGCAATGTTTCTGCA
GAGCCTGGTGCAGGAGGTGGAACTCAACATCGTGGCCGGCTACGGGTCCCCCAAAGACGT
GGCAGTATATGCGGCGCTGGGCCTGCCCCCGAGTCAGACCTACATCGTGGGCCGCGCTGT
GCGGAAGCTGCAGGCACAGTGCCAGTTCCTGTCGGATGGCTATGTGGCCCACCTGGGCCA
ACTGGAGGCAGGCTCCCACCCTCACGCCCCCTCTGGACCCTCGAGGGCCGCCCTGGCCAA
GAGCAGCTATGGCGGGGCCACCCCTGTGGACTTCCTCCGAAAACAGAGCCAGCTGCTTCG
CTCAAGGGGCCCCAGCCAGGCCGAGCGGGAGGGCCCAGGGACGCCGCCCACCACCCTGGC
TCGGGGCAAGGCCCGGAGCATCAGCCTCAAGCTGGACAGCGAAGAGTGAGCCCCAAACCG
TGGCTGGACTCAGGTTATTTATTCACACACTTGAGGGGCCCAAGTGGCCGCCTGTGGAAG
GCTGGGCCCCCAGCCCCACATCCTGCATCTCTGACTGCCCCTCAGCGTAACCTTCCCTTT
CATGTTGGGAGACCCGGCCCTGGGGAGGGGAGCAGCAGGGGCCCAGAGGCTTTTCCAATG
CGTGTCAATCCTTGGAAATAAACACCTCCTGCATCCCAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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TGCGCTGGGCATCGGCGTTTACCCGGTGCGCATGGTGGTCAGGGGCGACCACACCTACGC
CGAGTGCTGCCTGACGGTGGTGGCCTGTGGCACTGAGGCCGTGGTCTTCAGCATCGACGG
CTCCTTCACGGCCAGCGTCTCCATCATGGGCAGCGACCCCAAGGTGCGCGCCGGCGCTGT
GGACGTGGTCAGGCATTGGCAGGACGCGGGGTACCTGATCGTGTACGTAACGGGCCGGCC
TGATATGCAGAAGCACCGCGTGGTGGCCTGGCTGTCGCAGCACAACTTTCCCCACGGCGT
CGTCTCCTTCTGCGACGGCCTCACCCACGACCCGCTGCGCCAGAAGGCAATGTTTCTGCA
GAGCCTGGTGCAGGAGGTGGAACTCAACATCGTGGCCGGCTACGGGTCCCCCAAAGACGT
GGCAGTATATGCGGCGCTGGGCCTGCCCCCGAGTCAGACCTACATCGTGGGCCGCGCTGT
GCGGAAGCTGCAGGCACAGTGCCAGTTCCTGTCGGATGGCTATGTGGCCCACCTGGGCCA
ACTGGAGGCAGGCTCCCACCCTCACGCCCCCTCTGGACCCTCGAGGGCCGCCCTGGCCAA
GAGCAGCTATGGCGGGGCCACCCCTGTGGACTTCCTCCGAAAACAGAGCCAGCTGCTTCG
CTCAAGGGGCCCCAGCCAGGCCGAGCGGGAGGGCCCAGGGACGCCGCCCACCACCCTGGC
TCGGGGCAAGGCCCGGAGCATCAGCCTCAAGCTGGACAGCGAAGAGTGAGCCCCAAACCG
TGGCTGGACTCAGGTTATTTATTCACACACTTGAGGGGCCCAAGTGGCCGCCTGTGGAAG
GCTGGGCCCCCAGCCCCACATCCTGCATCTCTGACTGCCCCTCAGCGTAACCTTCCCTTT
CATGTTGGGAGACCCGGCCCTGGGGAGGGGAGCAGCAGGGGCCCAGAGGCTTTTCCAATG
CGTGTCAATCCTTGGAAATAAACACCTCCTGCATCCCAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
|
|
41-193, gnl|bosTau2|chr29 (39686948-39687100) |
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41-193, gnl|canFam2|chr18 (53010280-53010118) |
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41-193, gnl|danRer3|chrUn (13293076-13293231) |
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41-193, gnl|dasNov1|scaffold_177538 (597-757) |
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41-193, gnl|echTel1|scaffold_163556 (5055-4893) |
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41-193, gnl|fr1|chrUn (35884469-35884310) |
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41-193, gnl|galGal2|chr15 (5153148-5152991) |
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41-193, gnl|hg17|chr11 (67017731-67017893) |
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41-193, gnl|Hg17|chr11 (67017886-67017734) |
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41-193, gnl|loxAfr1|scaffold_65724 (4632-4470) |
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41-193, gnl|mm7|chr19 (4007062-4006900) |
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41-193, gnl|Mm7|chr19 (4006905-4007057) |
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41-193, gnl|monDom2|scaffold_97 (3423558-3423718) |
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41-193, gnl|oryCun1|scaffold_195345 (21068-21228) |
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41-193, gnl|panTro1|chr9 (68278206-68278368) |
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41-193, gnl|rheMac2|chr14 (6962561-6962399) |
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41-193, gnl|rn3|chr1 (206849198-206849036) |
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41-193, gnl|tetNig1|chrUn_random (1292667-1292503) |
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41-193, gnl|xenTro1|scaffold_100 (1860345-1860501) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
41-193, gnl|bosTau2|chr29 (39686948-39687100) |
|
41-193, gnl|canFam2|chr18 (53010280-53010118) |
|
41-193, gnl|danRer3|chrUn (13293076-13293231) |
|
41-193, gnl|dasNov1|scaffold_177538 (597-757) |
|
41-193, gnl|echTel1|scaffold_163556 (5055-4893) |
|
41-193, gnl|fr1|chrUn (35884469-35884310) |
|
41-193, gnl|galGal2|chr15 (5153148-5152991) |
|
41-193, gnl|hg17|chr11 (67017731-67017893) |
|
41-193, gnl|Hg17|chr11 (67017886-67017734) |
|
41-193, gnl|loxAfr1|scaffold_65724 (4632-4470) |
|
41-193, gnl|mm7|chr19 (4007062-4006900) |
|
41-193, gnl|Mm7|chr19 (4006905-4007057) |
|
41-193, gnl|monDom2|scaffold_97 (3423558-3423718) |
|
41-193, gnl|oryCun1|scaffold_195345 (21068-21228) |
|
41-193, gnl|panTro1|chr9 (68278206-68278368) |
|
41-193, gnl|rheMac2|chr14 (6962561-6962399) |
|
41-193, gnl|rn3|chr1 (206849198-206849036) |
|
41-193, gnl|tetNig1|chrUn_random (1292667-1292503) |
|
41-193, gnl|xenTro1|scaffold_100 (1860345-1860501) |
|
hyp (0.285673) |
|
fce (0.271592) |
|
ece (0.229305) |
|
fbs (0.175346) |
|
cag (0.151194) |
|
hlv (0.139256) |
|
ese (0.126502) |
|
hyp (0.285673) |
|
fce (0.271592) |
|
ece (0.229305) |
|
fbs (0.175346) |
|
cag (0.151194) |
|
hlv (0.139256) |
|
ese (0.126502) |
