Non-Coding RNA Search

Ss1.1-Pig3-SRG8011A19.5

Sequence:


               
               ACAACCACTCTTGCAGAAAGAGGAGCCCAACTTCAGGATAAAGATCGGCGAGTTATGACT
ATTTCAAGGTCCAAGACAATTCACTCCTTTCTTCTGAAGTGGCCAGGGGAACCGGCTCCT
AGGCTTTCCCAAAGTGGGCGTTTTTTTCAGGACCATCCCTGCAGGACTGAGCAGGCACTG
GGTCCCCAGGCCGCCAGTTCTTTGCTGATTTGGGGCTGAGCTCCCTCCTGGAAAAGCCAG
ACGGATGGCCCAGGTCCTCACCAAATGCACTCAGCTGAGCTGTCTCTCCTCTCTCTCTGC
AGTGTCCTCTCCAAGCCTGGTGATGCCCACATGTCACTTACTTGGTGCACAGCAACAAGG
ACCCTATTTTCCGCACCATCACCCTCCAGGCAGCTGTTGCAGAAAAGCGCAGTGACCTGC
CAAGCACCTGTGAGAGGTCCCTGTTCACCTGACATCCTGCCGGCACCTCGGACAATCCAC
TCTGAGAGGTGCGGCCGAAGCCCAGCTTCCCTTCTATGCAGTATTGTCACGATGCCTCTC
CCACGATGTCACGCGCTCCCGTCTGGTCTGTCCTCGAGGCGGGAGGCGACAAACCACGGA
AGAGGAAGAGAGAAAGCCGTAGTGTCTACCTTGTGCTCCTTCGACGAACAAACTGATGCG
AAAACTTGAATCTGTTACTGAAATGAGGAGAGGAGGACACGTGCTATTGAACTGAGCCAA
ACACACTGTAAATATCAGCCACCTCCCCCCCCTCCCCCATCCCAGCTGATCTGGAGATTT
CTTTTAAAGAAGTAAATTTGTCCAATGGGTGTAAACTATAAACTACTGTAATTAAGTGCA
ATTTCCCCTCCACTTCCTCCTCTCCCCTCTGCCCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAACCACTCTTGCAGAAAGAGGAGCCCAACTTCAGGATAAAGATCGGCGAGTTATGACT
ATTTCAAGGTCCAAGACAATTCACTCCTTTCTTCTGAAGTGGCCAGGGGAACCGGCTCCT
AGGCTTTCCCAAAGTGGGCGTTTTTTTCAGGACCATCCCTGCAGGACTGAGCAGGCACTG
GGTCCCCAGGCCGCCAGTTCTTTGCTGATTTGGGGCTGAGCTCCCTCCTGGAAAAGCCAG
ACGGATGGCCCAGGTCCTCACCAAATGCACTCAGCTGAGCTGTCTCTCCTCTCTCTCTGC
AGTGTCCTCTCCAAGCCTGGTGATGCCCACATGTCACTTACTTGGTGCACAGCAACAAGG
ACCCTATTTTCCGCACCATCACCCTCCAGGCAGCTGTTGCAGAAAAGCGCAGTGACCTGC
CAAGCACCTGTGAGAGGTCCCTGTTCACCTGACATCCTGCCGGCACCTCGGACAATCCAC
TCTGAGAGGTGCGGCCGAAGCCCAGCTTCCCTTCTATGCAGTATTGTCACGATGCCTCTC
CCACGATGTCACGCGCTCCCGTCTGGTCTGTCCTCGAGGCGGGAGGCGACAAACCACGGA
AGAGGAAGAGAGAAAGCCGTAGTGTCTACCTTGTGCTCCTTCGACGAACAAACTGATGCG
AAAACTTGAATCTGTTACTGAAATGAGGAGAGGAGGACACGTGCTATTGAACTGAGCCAA
ACACACTGTAAATATCAGCCACCTCCCCCCCCTCCCCCATCCCAGCTGATCTGGAGATTT
CTTTTAAAGAAGTAAATTTGTCCAATGGGTGTAAACTATAAACTACTGTAATTAAGTGCA
ATTTCCCCTCCACTTCCTCCTCTCCCCTCTGCCCTG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               6-876, gnl|bosTau2|chr19 (6884611-6885463)
               

               
               6-876, gnl|Hg17|chr17 (33121812-33120936)
               

               
               6-876, gnl|Mm7|chr11 (83974540-83975385)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-876, gnl|bosTau2|chr19 (6884611-6885463)
               

               
               6-876, gnl|Hg17|chr17 (33121812-33120936)
               

               
               6-876, gnl|Mm7|chr11 (83974540-83975385)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               eep (0.122564)
               

               
               eje (0.0988338)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)
               

               
               eje (0.0988338)

	6-876, gnl\|bosTau2\|chr19 (6884611-6885463)
	6-876, gnl\|Hg17\|chr17 (33121812-33120936)
	6-876, gnl\|Mm7\|chr11 (83974540-83975385)