Non-Coding RNA Search

Ss1.1-Pig3-SRG8011I23.5

Sequence:


               
               TCACTATACCTTCCTTTGCAGGAGAGATTCTAGAAATGTGAGACTTGAGAAAAAGTGGTC
CTTTCTTTTGAAATCTGTACTATGTCTGTCCTTTTCTCTCTCAGCAGTGTTAACCCCTTA
TCCAAGAACCCTGGGTTCGAATTTTGGTAGCTGCTTCTTGAGTAAGATGAGGCGAATATG
TAAGGTAATCTCTTGAGGCCTTTCCAGTTTTTAATACTGTAGATTTAATGAAAACTAGAA
CATTGGACTAGGGTATTAAGAGTAAATTCTATTCCAGTTGCTAGCTTTAAAGTCATTTAA
CGAATGACTCCTGAGCTAGCCATTTTTCCTTCCAGTCGTAGCTAAAGGGATAATTTCCCT
GGTAGGATTTCTTGTGAATGGATGAGATTTTATTTAAAAGAACTCTGAGCTGTTTAAATA
AAAGAGAAATATGTCTTACCTGTCTGCCTGCGCCCCTTTTCACCAAGGCATGGATTCTCC
ATGAGGGCAGGGATTTTGTCTCTGTGTTCATCACTGTCTCTGCAATGCCCCTGGAACAAT
GCCTGGCACACATAAGCTCTCAAAACAGGGGGACAAAAGAAGACTCAACAAGAAGTGAAC
TGCAACAGACTGACACCGCCACTTCAACTTACTGCTAACATAGATACCCTCATACACTGC
CTTTCTACTTGTTTGCAAAGATAAATTAGCCATCTGCCTAACTAAAAGCAGTCCTTCTAT
TTGTGCACTAGATTTCATGTCACTTAGCAAGGAAATTACTCCAGTAATTTTCCCCTCTTT
AACTTTTTTGCTTTCTTTAAGTTTATCATATTTGCATACAAATGTGCTATTATTTTTCCT
ATTTTAAAAATTCTTCTTTGGTGTAGCTACTATGGAGAACAGTATGGAGGTTTCTTGAAA
AACTAAAAGTAAAATTACCATATGATCCAGCAAACCCACTCCTGGACATATTCTGGAGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCACTATACCTTCCTTTGCAGGAGAGATTCTAGAAATGTGAGACTTGAGAAAAAGTGGTC
CTTTCTTTTGAAATCTGTACTATGTCTGTCCTTTTCTCTCTCAGCAGTGTTAACCCCTTA
TCCAAGAACCCTGGGTTCGAATTTTGGTAGCTGCTTCTTGAGTAAGATGAGGCGAATATG
TAAGGTAATCTCTTGAGGCCTTTCCAGTTTTTAATACTGTAGATTTAATGAAAACTAGAA
CATTGGACTAGGGTATTAAGAGTAAATTCTATTCCAGTTGCTAGCTTTAAAGTCATTTAA
CGAATGACTCCTGAGCTAGCCATTTTTCCTTCCAGTCGTAGCTAAAGGGATAATTTCCCT
GGTAGGATTTCTTGTGAATGGATGAGATTTTATTTAAAAGAACTCTGAGCTGTTTAAATA
AAAGAGAAATATGTCTTACCTGTCTGCCTGCGCCCCTTTTCACCAAGGCATGGATTCTCC
ATGAGGGCAGGGATTTTGTCTCTGTGTTCATCACTGTCTCTGCAATGCCCCTGGAACAAT
GCCTGGCACACATAAGCTCTCAAAACAGGGGGACAAAAGAAGACTCAACAAGAAGTGAAC
TGCAACAGACTGACACCGCCACTTCAACTTACTGCTAACATAGATACCCTCATACACTGC
CTTTCTACTTGTTTGCAAAGATAAATTAGCCATCTGCCTAACTAAAAGCAGTCCTTCTAT
TTGTGCACTAGATTTCATGTCACTTAGCAAGGAAATTACTCCAGTAATTTTCCCCTCTTT
AACTTTTTTGCTTTCTTTAAGTTTATCATATTTGCATACAAATGTGCTATTATTTTTCCT
ATTTTAAAAATTCTTCTTTGGTGTAGCTACTATGGAGAACAGTATGGAGGTTTCTTGAAA
AACTAAAAGTAAAATTACCATATGATCCAGCAAACCCACTCCTGGACATATTCTGGAGAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               8-237, gnl|bosTau2|chr2 (65055230-65055004)
               

               
               8-237, gnl|Mm7|chr1 (75249668-75249468)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-237, gnl|bosTau2|chr2 (65055230-65055004)
               

               
               8-237, gnl|Mm7|chr1 (75249668-75249468)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               ton (0.1755)
               

               
               mga (0.160205)
               

               
               ski (0.146735)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ton (0.1755)
               

               
               mga (0.160205)
               

               
               ski (0.146735)

	8-237, gnl\|bosTau2\|chr2 (65055230-65055004)
	8-237, gnl\|Mm7\|chr1 (75249668-75249468)