Non-Coding RNA Search

Ss1.1-Pig3-SRG8011J02.3

Sequence:


               
               AGGAGAAGACCAGTCAATTCACTTGTTTTTGCAAAACAGTTAAGGATCCAGTAATTCAGG
AAAGCAGAGACCTTAGCTCCACATATAACGTCTTGATTTCAGTAACCTAATGCTTAATCA
CTGAGAGACCTTCGTCATATGGTCTCTCCAAAAGAAAAAGAACCCGTGGAACTCAGCTTG
GCTTCCTCGGGGACTCGGGTCTGTCCATCAGTCAGATCCTTAATGAAGGAAGCAAAATGG
AAGCTGGGAGCAACGAGTGTGTCTAGTTGCAAGGGCTTGGCCTGGACCCGTTCGCTGAAA
CAGCACTGAAAATTAAACACGGATTCCCTGATGGTATCGTTAGAGCCGTCTGTTGTGTCT
GACGGTTGGCACAGACAGTAAAGGAACAAGCACCCCCTTGCAGGACTTGTGGGATCGTGC
ACACATGGCAGTGGGGTGAACGGGCCCTGGCGCCACGGGCAGGCCTGGGGCTGCTTAGTC
TAAGAGTGATGCTCAGACCCGTGGAACACGCGCGTCCAAATCCTGAAAATGTCAAAGAGG
ACCCAACACGCGGCGGCCCCTCTTACCTGATGAAAGAAGGCGTGCATCGTTGACTGACAG
CGGTAGGAGCTATATGTATATTTGTGTGTGTGTGTTTTGTGCATAACTATTTAAGGAAAC
TGGAATTTTAAAGTTACGTTTATACAAACCAAGAATATATGCTGCAGATCTAAGACAGAA
TTTGATCCTACATCTCTAGTCACTATGAATGTATTTTGTATGCTATCTTCATATAATAAA
CTTAACTTCCAAATAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGAGAAGACCAGTCAATTCACTTGTTTTTGCAAAACAGTTAAGGATCCAGTAATTCAGG
AAAGCAGAGACCTTAGCTCCACATATAACGTCTTGATTTCAGTAACCTAATGCTTAATCA
CTGAGAGACCTTCGTCATATGGTCTCTCCAAAAGAAAAAGAACCCGTGGAACTCAGCTTG
GCTTCCTCGGGGACTCGGGTCTGTCCATCAGTCAGATCCTTAATGAAGGAAGCAAAATGG
AAGCTGGGAGCAACGAGTGTGTCTAGTTGCAAGGGCTTGGCCTGGACCCGTTCGCTGAAA
CAGCACTGAAAATTAAACACGGATTCCCTGATGGTATCGTTAGAGCCGTCTGTTGTGTCT
GACGGTTGGCACAGACAGTAAAGGAACAAGCACCCCCTTGCAGGACTTGTGGGATCGTGC
ACACATGGCAGTGGGGTGAACGGGCCCTGGCGCCACGGGCAGGCCTGGGGCTGCTTAGTC
TAAGAGTGATGCTCAGACCCGTGGAACACGCGCGTCCAAATCCTGAAAATGTCAAAGAGG
ACCCAACACGCGGCGGCCCCTCTTACCTGATGAAAGAAGGCGTGCATCGTTGACTGACAG
CGGTAGGAGCTATATGTATATTTGTGTGTGTGTGTTTTGTGCATAACTATTTAAGGAAAC
TGGAATTTTAAAGTTACGTTTATACAAACCAAGAATATATGCTGCAGATCTAAGACAGAA
TTTGATCCTACATCTCTAGTCACTATGAATGTATTTTGTATGCTATCTTCATATAATAAA
CTTAACTTCCAAATAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               19-793, gnl|bosTau2|chr12 (14931475-14930653)
               

               
               19-793, gnl|Hg17|chr13 (27773330-27772489)
               

               
               19-793, gnl|Mm7|chr5 (146456810-146456013)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               19-793, gnl|bosTau2|chr12 (14931475-14930653)
               

               
               19-793, gnl|Hg17|chr13 (27773330-27772489)
               

               
               19-793, gnl|Mm7|chr5 (146456810-146456013)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               bfe (0.149858)
               

               
               pla (0.133672)
               

               
               ese (0.126502)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bfe (0.149858)
               

               
               pla (0.133672)
               

               
               ese (0.126502)

	19-793, gnl\|bosTau2\|chr12 (14931475-14930653)
	19-793, gnl\|Hg17\|chr13 (27773330-27772489)
	19-793, gnl\|Mm7\|chr5 (146456810-146456013)