Non-Coding RNA Search

Ss1.1-Pig3-SRG8011O03.3

Sequence:


               
               GTGTGTGAGCTTGCCACCACCTCTCTGCGGAAGACGGTCTGCTCAGACTCCGGACCCTGC
TCCACACGGACCCAAGCCCGGAGAAAGCCACAACGCGGGCACGCTACTGATGAACCCTAG
GATTTGGTTTTACAGTGACGTTAATACAAGCCATTCGGGATCAAAGTTGCCCCGTGGATG
GGACACAGAGCAGCATTAAACAGTTCATCTTTCAAGATGTGCAACAACGGCTGTATGTTA
GAGATGTCTGTGAAACAGATACACACAACGGATCCATCTGCTTGTTGGACTGGGTTTGTT
TGGTGGTGGTGGTGGTGGTGGTGGTGGTGACTGGTTGGTTGTGTTTCCCTACCCAGAAGG
TGTATGAAAGACCTCTAAGAATTCGTCAAGAACTGCAGCGGGTATGGAACGCTTACCATT
TTTTTCTCCAAATACAGTGAATGGTGCAGGGCTGGGTCCTGTCCAAAGGCTGACCCATGG
CAGGGGACAGGATCGGTAGTGTCCTGTGGTGTATGGTTCTCATGCATGACTTCTGATCAC
GGCATGCCATCATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCC
TGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTTGTTTTCCCCCACCCATCTCCAAAC
CACGTGAAGCCCATGTGGAGAAGATGCGGTTTATGCCAAAGAAAGTGACCGTTAAATGAC
ACGGGCTAAATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGTGTGAGCTTGCCACCACCTCTCTGCGGAAGACGGTCTGCTCAGACTCCGGACCCTGC
TCCACACGGACCCAAGCCCGGAGAAAGCCACAACGCGGGCACGCTACTGATGAACCCTAG
GATTTGGTTTTACAGTGACGTTAATACAAGCCATTCGGGATCAAAGTTGCCCCGTGGATG
GGACACAGAGCAGCATTAAACAGTTCATCTTTCAAGATGTGCAACAACGGCTGTATGTTA
GAGATGTCTGTGAAACAGATACACACAACGGATCCATCTGCTTGTTGGACTGGGTTTGTT
TGGTGGTGGTGGTGGTGGTGGTGGTGGTGACTGGTTGGTTGTGTTTCCCTACCCAGAAGG
TGTATGAAAGACCTCTAAGAATTCGTCAAGAACTGCAGCGGGTATGGAACGCTTACCATT
TTTTTCTCCAAATACAGTGAATGGTGCAGGGCTGGGTCCTGTCCAAAGGCTGACCCATGG
CAGGGGACAGGATCGGTAGTGTCCTGTGGTGTATGGTTCTCATGCATGACTTCTGATCAC
GGCATGCCATCATGCAAATCATTTCTACGCATTGAACGAGCACAATGTTTGGAATCGGCC
TGAGCAAGTCCTCCTCAGCCTGAAGAAACCTGATTTGTTTTCCCCCACCCATCTCCAAAC
CACGTGAAGCCCATGTGGAGAAGATGCGGTTTATGCCAAAGAAAGTGACCGTTAAATGAC
ACGGGCTAAATG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               115-732, gnl|bosTau2|chr5 (21429032-21428415)
               

               
               115-732, gnl|Hg17|chr12 (50488562-50487954)
               

               
               115-732, gnl|Mm7|chr15 (101027017-101026447)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               115-732, gnl|bosTau2|chr5 (21429032-21428415)
               

               
               115-732, gnl|Hg17|chr12 (50488562-50487954)
               

               
               115-732, gnl|Mm7|chr15 (101027017-101026447)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nep (0.183925)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)

	115-732, gnl\|bosTau2\|chr5 (21429032-21428415)
	115-732, gnl\|Hg17\|chr12 (50488562-50487954)
	115-732, gnl\|Mm7\|chr15 (101027017-101026447)