Ss1.1-Pig3-SRG8011P20.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGAGGATGACCAGACCTCTCTGCCCTCCTCCTTCCAGCCCCAGTCTTGCCGTGTCCACGG CGGCAGCTGGATCCTGTTTGATGAGAAGAACTTCGAGGGTGAGCAGCACATCCTCTCTGA GGGCGAGTTCCCCACGCTCACGGCCATGGGCTGCCTGGCCTCCACAGTCCTGGGCTCTCT CCGGAAGGTGCCACTGCACTTTTCAGAGCCATCCATTTTCCTGTACGGGCTGGAGTGCTT CGAGGGGAAGGAGATCGAGCTCCGCCGGGAGGTGCGGAGCCTGCAAGCCGAGGGCTTCAA CAACCACGTGCTGTCCGTGCGGATCAAGGGGGGCGTCTGGGTGCTGTGTGAGCACAGCGA CTTCCGGGGCCGCCAGTGGCTGGTGGGCAGCTGCGAGATCACCAACTGGCTGACGTACAG CGGGACCCAGAGGGTGGGCTCCCTCTACCCCATCAAGCAGCGCCGGGCATACTTCCGCCT CTGGAATGCGGCACTGGGGGGATTCCTAGCAGTGCCCGACCATGTGGAGGACATGAAGGC GGGCCGTGTGGTGGTCTCTGAGCCCCGAGCCGGAGGCAGCTGCATCTGGTACTATGAGGA TGGGCTGCTGAAGAACCAGGTGGCCCCCACCATGAGCCTGCAGGTGATTGGGCCCCCCAG CACAGGTTCCAAGGTGGTGCTGTGGGCTGAGAGCCGCCTGCCCCGCCAGATGTGGAGCAT CAGCGAATCGGGCCACATTTGCAGCCAGATGTTCGAAGGCCGGATCCTAGATGTGAAGGG TGGCCGGGGCTACGACCGGGACCACGCAGTGCTGTGGGAGCCGGCCAAGGACAGGGCCAC CCAGATCTGGACTGTCCATGTACTTTGAACTTCCCCCTCCACCCCCAGCCCTGGAGGCTT TCCCTGGGATTGTTTTTATAGGGTTTTTTGGTTGTAACATAAATCTGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGAGGATGACCAGACCTCTCTGCCCTCCTCCTTCCAGCCCCAGTCTTGCCGTGTCCACGG CGGCAGCTGGATCCTGTTTGATGAGAAGAACTTCGAGGGTGAGCAGCACATCCTCTCTGA GGGCGAGTTCCCCACGCTCACGGCCATGGGCTGCCTGGCCTCCACAGTCCTGGGCTCTCT CCGGAAGGTGCCACTGCACTTTTCAGAGCCATCCATTTTCCTGTACGGGCTGGAGTGCTT CGAGGGGAAGGAGATCGAGCTCCGCCGGGAGGTGCGGAGCCTGCAAGCCGAGGGCTTCAA CAACCACGTGCTGTCCGTGCGGATCAAGGGGGGCGTCTGGGTGCTGTGTGAGCACAGCGA CTTCCGGGGCCGCCAGTGGCTGGTGGGCAGCTGCGAGATCACCAACTGGCTGACGTACAG CGGGACCCAGAGGGTGGGCTCCCTCTACCCCATCAAGCAGCGCCGGGCATACTTCCGCCT CTGGAATGCGGCACTGGGGGGATTCCTAGCAGTGCCCGACCATGTGGAGGACATGAAGGC GGGCCGTGTGGTGGTCTCTGAGCCCCGAGCCGGAGGCAGCTGCATCTGGTACTATGAGGA TGGGCTGCTGAAGAACCAGGTGGCCCCCACCATGAGCCTGCAGGTGATTGGGCCCCCCAG CACAGGTTCCAAGGTGGTGCTGTGGGCTGAGAGCCGCCTGCCCCGCCAGATGTGGAGCAT CAGCGAATCGGGCCACATTTGCAGCCAGATGTTCGAAGGCCGGATCCTAGATGTGAAGGG TGGCCGGGGCTACGACCGGGACCACGCAGTGCTGTGGGAGCCGGCCAAGGACAGGGCCAC CCAGATCTGGACTGTCCATGTACTTTGAACTTCCCCCTCCACCCCCAGCCCTGGAGGCTT TCCCTGGGATTGTTTTTATAGGGTTTTTTGGTTGTAACATAAATCTGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 64-196, gnl|bosTau2|chr2 (78182615-78182483) | |
| 64-196, gnl|Hg17|chr1 (26342254-26342122) | |
| 64-196, gnl|Mm7|chr4 (133465917-133466048) | |
| 198-343, gnl|bosTau2|chr2 (78181204-78181059) | |
| 198-343, gnl|Hg17|chr1 (26339505-26339360) | |
| 198-343, gnl|Mm7|chr4 (133467227-133467372) | |
| 617-781, gnl|bosTau2|chr2 (78177917-78177753) | |
| 617-781, gnl|canFam2|chr2 (76589290-76589113) | |
| 617-781, gnl|danRer3|chr9 (3799839-3800016) | |
| 617-781, gnl|echTel1|scaffold_286990 (7730-7908) | |
| 617-781, gnl|fr1|chrUn (124671764-124671590) | |
| 617-781, gnl|galGal2|chr23 (192504-192328) | |
| 617-781, gnl|hg17|chr1 (26332784-26332961) | |
| 617-781, gnl|Hg17|chr1 (26332959-26332795) | |
| 617-781, gnl|loxAfr1|scaffold_92877 (7706-7529) | |
| 617-781, gnl|mm7|chr4 (133470654-133470480) | |
| 617-781, gnl|Mm7|chr4 (133470480-133470644) | |
| 617-781, gnl|monDom2|scaffold_91 (3882232-3882406) | |
| 617-781, gnl|oryCun1|scaffold_200570 (66190-66367) | |
| 617-781, gnl|panTro1|chr1 (27021227-27021404) | |
| 617-781, gnl|rheMac2|chr1 (28941973-28942150) | |
| 617-781, gnl|rn3|chr5 (152851386-152851204) | |
| 617-781, gnl|tetNig1|chr21_random (480150-479986) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 64-196, gnl|bosTau2|chr2 (78182615-78182483) | |
| 64-196, gnl|Hg17|chr1 (26342254-26342122) | |
| 64-196, gnl|Mm7|chr4 (133465917-133466048) | |
| 198-343, gnl|bosTau2|chr2 (78181204-78181059) | |
| 198-343, gnl|Hg17|chr1 (26339505-26339360) | |
| 198-343, gnl|Mm7|chr4 (133467227-133467372) | |
| 617-781, gnl|bosTau2|chr2 (78177917-78177753) | |
| 617-781, gnl|canFam2|chr2 (76589290-76589113) | |
| 617-781, gnl|danRer3|chr9 (3799839-3800016) | |
| 617-781, gnl|echTel1|scaffold_286990 (7730-7908) | |
| 617-781, gnl|fr1|chrUn (124671764-124671590) | |
| 617-781, gnl|galGal2|chr23 (192504-192328) | |
| 617-781, gnl|hg17|chr1 (26332784-26332961) | |
| 617-781, gnl|Hg17|chr1 (26332959-26332795) | |
| 617-781, gnl|loxAfr1|scaffold_92877 (7706-7529) | |
| 617-781, gnl|mm7|chr4 (133470654-133470480) | |
| 617-781, gnl|Mm7|chr4 (133470480-133470644) | |
| 617-781, gnl|monDom2|scaffold_91 (3882232-3882406) | |
| 617-781, gnl|oryCun1|scaffold_200570 (66190-66367) | |
| 617-781, gnl|panTro1|chr1 (27021227-27021404) | |
| 617-781, gnl|rheMac2|chr1 (28941973-28942150) | |
| 617-781, gnl|rn3|chr5 (152851386-152851204) | |
| 617-781, gnl|tetNig1|chr21_random (480150-479986) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| jej (0.197844) | |
| duo (0.172801) |