Ss1.1-Pig3-SRG8012B19.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAAGCACATCGCGGAGGTGTCCCAGGAGGTCACCCGTTCTCTGAAGGATTTTTCTTCCAG CAAGAGAATGAATACTGGAGAGAAGACCACCATGCGGGACCTGTCCCAGATGCTGAAGAA AATGCCCCAGTACCAGAAGGAGCTCAGCAAGTATTCGACCCACCTGCACCTGGCAGAGGA CTGCATGAAGCACTACCAAGGCACCGTGGATAAACTCTGCCGGGTGGAACAGGACCTGGC CATGGGCACGGATGCCGAAGGGGAGAAGATCAAGGACCCCATGAGAGCCATCGTCCCCAT TCTGCTGGATGCCAATGTCAGCACTTACGACAAGATCCGCATCATCCTTCTCTACATCTT TTTGAAGAACGGCATCACGGAGGAGAATCTGAACAAGCTGATCCAGCACGCCCAGATCCC ACCAGAGGACAGCGAAATCATCACCAACATGGCGCACCTCGGGGTGCCCATCGTCACCGA CTCCACGCTGCGTCGCAGGAGCAAACCGGAGCGGAAGGAGCGCATCAGCGAGCAGACCTA CCAGCTGTCACGATGGACCCCGATCATCAAAGACATCATGGAGGACACGATTGAAGACAA ACTGGATACCAAGCACTATCCTTACATCTCCACCCGCTCCTCGGCCTCCTTCAGCACCAC GGCCGTCAGCGCCCGCTATGGGCACTGGCATAAGAATAAGGCCCCAGGGGAGTACCGCAG TGGGCCCCGCCTCATCATCTTCATCCTGGGAGGCGTGAGCCTGAACGAGATGCGCTGCGC TTACGAGGTGACCCAAGCCAACGGAAAGTGGGAAGTGCTCATAGGATCCACGCACATTCT CACCCCACAGAAACTGCTGGACACGCTGAAGAAACTGAATAAAACAGATGAAGAAATAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAAGCACATCGCGGAGGTGTCCCAGGAGGTCACCCGTTCTCTGAAGGATTTTTCTTCCAG CAAGAGAATGAATACTGGAGAGAAGACCACCATGCGGGACCTGTCCCAGATGCTGAAGAA AATGCCCCAGTACCAGAAGGAGCTCAGCAAGTATTCGACCCACCTGCACCTGGCAGAGGA CTGCATGAAGCACTACCAAGGCACCGTGGATAAACTCTGCCGGGTGGAACAGGACCTGGC CATGGGCACGGATGCCGAAGGGGAGAAGATCAAGGACCCCATGAGAGCCATCGTCCCCAT TCTGCTGGATGCCAATGTCAGCACTTACGACAAGATCCGCATCATCCTTCTCTACATCTT TTTGAAGAACGGCATCACGGAGGAGAATCTGAACAAGCTGATCCAGCACGCCCAGATCCC ACCAGAGGACAGCGAAATCATCACCAACATGGCGCACCTCGGGGTGCCCATCGTCACCGA CTCCACGCTGCGTCGCAGGAGCAAACCGGAGCGGAAGGAGCGCATCAGCGAGCAGACCTA CCAGCTGTCACGATGGACCCCGATCATCAAAGACATCATGGAGGACACGATTGAAGACAA ACTGGATACCAAGCACTATCCTTACATCTCCACCCGCTCCTCGGCCTCCTTCAGCACCAC GGCCGTCAGCGCCCGCTATGGGCACTGGCATAAGAATAAGGCCCCAGGGGAGTACCGCAG TGGGCCCCGCCTCATCATCTTCATCCTGGGAGGCGTGAGCCTGAACGAGATGCGCTGCGC TTACGAGGTGACCCAAGCCAACGGAAAGTGGGAAGTGCTCATAGGATCCACGCACATTCT CACCCCACAGAAACTGCTGGACACGCTGAAGAAACTGAATAAAACAGATGAAGAAATAAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 230-372, gnl|bosTau2|chr11 (79528046-79528188) | |
| 230-372, gnl|canFam2|chr9 (59051907-59051738) | |
| 230-372, gnl|danRer3|chr21 (4216086-4216255) | |
| 230-372, gnl|dasNov1|scaffold_3815 (43394-43563) | |
| 230-372, gnl|echTel1|scaffold_293917 (21960-22128) | |
| 230-372, gnl|fr1|chrUn (239846431-239846595) | |
| 230-372, gnl|galGal2|chr17 (8476248-8476078) | |
| 230-372, gnl|hg17|chr9 (127517622-127517790) | |
| 230-372, gnl|Hg17|chr9 (127517634-127517776) | |
| 230-372, gnl|mm7|chr2 (32810220-32810050) | |
| 230-372, gnl|Mm7|chr2 (32810206-32810064) | |
| 230-372, gnl|monDom2|scaffold_51 (2034003-2034174) | |
| 230-372, gnl|panTro1|chr11 (112334121-112334289) | |
| 230-372, gnl|rheMac2|chr15 (98908108-98907940) | |
| 230-372, gnl|rn3|chr3 (11672235-11672065) | |
| 230-372, gnl|tetNig1|chrUn_random (12662217-12662075) | |
| 230-372, gnl|xenTro1|scaffold_257 (585495-585651) | |
| 482-587, gnl|bosTau2|chr11 (79530501-79530606) | |
| 482-587, gnl|Hg17|chr9 (127520264-127520369) | |
| 482-587, gnl|Mm7|chr2 (32807992-32807887) | |
| 667-825, gnl|bosTau2|chr11 (79534841-79534999) | |
| 667-825, gnl|canFam2|chr9 (59045048-59044830) | |
| 667-825, gnl|danRer3|chr21 (4223207-4223381) | |
| 667-825, gnl|dasNov1|scaffold_3815 (50881-51095) | |
| 667-825, gnl|echTel1|scaffold_242987 (14045-13832) | |
| 667-825, gnl|fr1|chrUn (239848492-239848695) | |
| 667-825, gnl|hg17|chr9 (127524218-127524429) | |
| 667-825, gnl|Hg17|chr9 (127524237-127524394) | |
| 667-825, gnl|loxAfr1|scaffold_32227 (31436-31651) | |
| 667-825, gnl|mm7|chr2 (32803497-32803298) | |
| 667-825, gnl|Mm7|chr2 (32803483-32803326) | |
| 667-825, gnl|monDom2|scaffold_51 (2041674-2041888) | |
| 667-825, gnl|oryCun1|scaffold_94224 (5607-5397) | |
| 667-825, gnl|panTro1|chr11 (112340348-112340559) | |
| 667-825, gnl|rheMac2|chr15 (98901742-98901531) | |
| 667-825, gnl|rn3|chr3 (11666404-11666216) | |
| 667-825, gnl|tetNig1|chrUn_random (12661087-12660923) | |
| 667-825, gnl|xenTro1|scaffold_257 (587682-587874) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 230-372, gnl|bosTau2|chr11 (79528046-79528188) | |
| 230-372, gnl|canFam2|chr9 (59051907-59051738) | |
| 230-372, gnl|danRer3|chr21 (4216086-4216255) | |
| 230-372, gnl|dasNov1|scaffold_3815 (43394-43563) | |
| 230-372, gnl|echTel1|scaffold_293917 (21960-22128) | |
| 230-372, gnl|fr1|chrUn (239846431-239846595) | |
| 230-372, gnl|galGal2|chr17 (8476248-8476078) | |
| 230-372, gnl|hg17|chr9 (127517622-127517790) | |
| 230-372, gnl|Hg17|chr9 (127517634-127517776) | |
| 230-372, gnl|mm7|chr2 (32810220-32810050) | |
| 230-372, gnl|Mm7|chr2 (32810206-32810064) | |
| 230-372, gnl|monDom2|scaffold_51 (2034003-2034174) | |
| 230-372, gnl|panTro1|chr11 (112334121-112334289) | |
| 230-372, gnl|rheMac2|chr15 (98908108-98907940) | |
| 230-372, gnl|rn3|chr3 (11672235-11672065) | |
| 230-372, gnl|tetNig1|chrUn_random (12662217-12662075) | |
| 230-372, gnl|xenTro1|scaffold_257 (585495-585651) | |
| 482-587, gnl|bosTau2|chr11 (79530501-79530606) | |
| 482-587, gnl|Hg17|chr9 (127520264-127520369) | |
| 482-587, gnl|Mm7|chr2 (32807992-32807887) | |
| 667-825, gnl|bosTau2|chr11 (79534841-79534999) | |
| 667-825, gnl|canFam2|chr9 (59045048-59044830) | |
| 667-825, gnl|danRer3|chr21 (4223207-4223381) | |
| 667-825, gnl|dasNov1|scaffold_3815 (50881-51095) | |
| 667-825, gnl|echTel1|scaffold_242987 (14045-13832) | |
| 667-825, gnl|fr1|chrUn (239848492-239848695) | |
| 667-825, gnl|hg17|chr9 (127524218-127524429) | |
| 667-825, gnl|Hg17|chr9 (127524237-127524394) | |
| 667-825, gnl|loxAfr1|scaffold_32227 (31436-31651) | |
| 667-825, gnl|mm7|chr2 (32803497-32803298) | |
| 667-825, gnl|Mm7|chr2 (32803483-32803326) | |
| 667-825, gnl|monDom2|scaffold_51 (2041674-2041888) | |
| 667-825, gnl|oryCun1|scaffold_94224 (5607-5397) | |
| 667-825, gnl|panTro1|chr11 (112340348-112340559) | |
| 667-825, gnl|rheMac2|chr15 (98901742-98901531) | |
| 667-825, gnl|rn3|chr3 (11666404-11666216) | |
| 667-825, gnl|tetNig1|chrUn_random (12661087-12660923) | |
| 667-825, gnl|xenTro1|scaffold_257 (587682-587874) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hyp (0.142837) |