Ss1.1-Pig3-SRG8012F12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGAACGGGAACGATGGGAGAAAACCAGTGAAACTTTCAAAAATCAGATGTCCACCATCGC CGGGGACTGTCTCTTGTCCGCCGCGTTCATCGCTTACGCGGGTTACTTTGACCAGCAGAT GCGTCAGAACCTGTTCACCACCTGGTCCCATCACCTGCAGCAAGCCAACATCCAGTTCCG CACAGACATCGCCAGGACGGAGTACCTGTCCAACGCCGACGAGCGCCTGCGCTGGCAGGC CAGCTCCCTGCCCGCGGACGACCTGTGCACGGAAAACGCCATCATGCTCAAACGCTTCAA CAGGTACCCGCTGATCATCGACCCCTCGGGGCAGGCCACGGAGTTCATCATGAACGAGTA CAAGGACCGCAAGATCACGCGCACCAGCTTCCTGGACGACGCCTTCCGGAAGAACCTGGA GAGCGCCCTGCGATTCGGCAACCCCCTTCTGGTCCAGGACGTGGAGAGCTACGACCCAGT TCTGAATCCGGTGCTGAACCGTGAGGTCCGGCGAACGGGGGGCAGAGTGCTGATCACCCT CGGGGACCAGGACATAGATCTGTCACCGTCCTTTGTCATCTTCCTGTCCACCCGAGACCC AACCGTGGAGTTCCCCCCGGACCTCTGTTCCCGGGTGACCTTCGTCAACTTCACCGTCAC CCGCAGCAGCTTGCAGAGCCAGTGTCTCAATGAAGTTCTCAAAGCAGAAAGACCGGACGT GGACGAAAAACGATCCGACCTTCTCAAACTCCAAGGGGAGTTTCAGCTGCGCTTACGGCA GCTGGAGAAATCGCTGCTCCAAGCCCTGAACGAGGTGAAGGGACGCATCTTGGATGACGA CACCATCATAACGACCCTGGAGAACCTGAAGATGGATGCGGCCGATGTGACGCGCAAGGT GGAGGAGACGGACATCGTGATGCATGATGTGGAGACCGTGTCCCATCATCTCTGAAGGAA GCTGAGAGCAGACAGCACCATGTCATGTCTGTGGACCACTACACCCTCTGCTGCAGATAT GAAGACACGTCCTCCATGCTTTTTAGTGTTGCAGCCCAGATCAACTCGCTACTCCCCATG GTGCATCTTTCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGAACGGGAACGATGGGAGAAAACCAGTGAAACTTTCAAAAATCAGATGTCCACCATCGC CGGGGACTGTCTCTTGTCCGCCGCGTTCATCGCTTACGCGGGTTACTTTGACCAGCAGAT GCGTCAGAACCTGTTCACCACCTGGTCCCATCACCTGCAGCAAGCCAACATCCAGTTCCG CACAGACATCGCCAGGACGGAGTACCTGTCCAACGCCGACGAGCGCCTGCGCTGGCAGGC CAGCTCCCTGCCCGCGGACGACCTGTGCACGGAAAACGCCATCATGCTCAAACGCTTCAA CAGGTACCCGCTGATCATCGACCCCTCGGGGCAGGCCACGGAGTTCATCATGAACGAGTA CAAGGACCGCAAGATCACGCGCACCAGCTTCCTGGACGACGCCTTCCGGAAGAACCTGGA GAGCGCCCTGCGATTCGGCAACCCCCTTCTGGTCCAGGACGTGGAGAGCTACGACCCAGT TCTGAATCCGGTGCTGAACCGTGAGGTCCGGCGAACGGGGGGCAGAGTGCTGATCACCCT CGGGGACCAGGACATAGATCTGTCACCGTCCTTTGTCATCTTCCTGTCCACCCGAGACCC AACCGTGGAGTTCCCCCCGGACCTCTGTTCCCGGGTGACCTTCGTCAACTTCACCGTCAC CCGCAGCAGCTTGCAGAGCCAGTGTCTCAATGAAGTTCTCAAAGCAGAAAGACCGGACGT GGACGAAAAACGATCCGACCTTCTCAAACTCCAAGGGGAGTTTCAGCTGCGCTTACGGCA GCTGGAGAAATCGCTGCTCCAAGCCCTGAACGAGGTGAAGGGACGCATCTTGGATGACGA CACCATCATAACGACCCTGGAGAACCTGAAGATGGATGCGGCCGATGTGACGCGCAAGGT GGAGGAGACGGACATCGTGATGCATGATGTGGAGACCGTGTCCCATCATCTCTGAAGGAA GCTGAGAGCAGACAGCACCATGTCATGTCTGTGGACCACTACACCCTCTGCTGCAGATAT GAAGACACGTCCTCCATGCTTTTTAGTGTTGCAGCCCAGATCAACTCGCTACTCCCCATG GTGCATCTTTCA |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 2-175, gnl|bosTau2|chr21 (46521964-46522137) | |
| 2-175, gnl|Hg17|chr14 (101570105-101570278) | |
| 2-175, gnl|Mm7|chr12 (108174584-108174757) | |
| 301-458, gnl|bosTau2|chr21 (46523888-46524045) | |
| 301-458, gnl|canFam2|chr8 (73097419-73097617) | |
| 301-458, gnl|danRer3|chr8 (31229646-31229806) | |
| 301-458, gnl|dasNov1|scaffold_6554 (55946-56141) | |
| 301-458, gnl|fr1|chrUn (64456935-64457124) | |
| 301-458, gnl|galGal2|chr5 (46272725-46272901) | |
| 301-458, gnl|hg17|chr14 (101572557-101572757) | |
| 301-458, gnl|Hg17|chr14 (101572576-101572733) | |
| 301-458, gnl|loxAfr1|scaffold_54624 (12701-12907) | |
| 301-458, gnl|mm7|chr12 (108175281-108175481) | |
| 301-458, gnl|Mm7|chr12 (108175300-108175457) | |
| 301-458, gnl|monDom2|scaffold_6 (85184915-85185103) | |
| 301-458, gnl|oryCun1|scaffold_129802 (5424-5623) | |
| 301-458, gnl|panTro1|chr15 (102178106-102178306) | |
| 301-458, gnl|rheMac2|chr7 (165328286-165328486) | |
| 301-458, gnl|rn3|chr6 (135386942-135387141) | |
| 301-458, gnl|tetNig1|chr10 (7367769-7367927) | |
| 301-458, gnl|xenTro1|scaffold_178 (1676299-1676479) | |
| 605-756, gnl|bosTau2|chr21 (46524865-46525016) | |
| 605-756, gnl|canFam2|chr8 (73098230-73098426) | |
| 605-756, gnl|dasNov1|scaffold_6554 (56836-57032) | |
| 605-756, gnl|fr1|chrUn (64457413-64457611) | |
| 605-756, gnl|galGal2|chr5 (46273798-46273990) | |
| 605-756, gnl|hg17|chr14 (101574751-101574947) | |
| 605-756, gnl|Hg17|chr14 (101574788-101574939) | |
| 605-756, gnl|loxAfr1|scaffold_54624 (13722-13915) | |
| 605-756, gnl|mm7|chr12 (108176302-108176496) | |
| 605-756, gnl|Mm7|chr12 (108176337-108176488) | |
| 605-756, gnl|monDom2|scaffold_6 (85185825-85186023) | |
| 605-756, gnl|oryCun1|scaffold_129918 (735-538) | |
| 605-756, gnl|panTro1|chr15 (102180299-102180495) | |
| 605-756, gnl|rheMac2|chr7 (165330813-165331009) | |
| 605-756, gnl|rn3|chr6 (135387987-135388180) | |
| 605-756, gnl|tetNig1|chr10 (7368198-7368389) | |
| 605-756, gnl|xenTro1|scaffold_178 (1676743-1676934) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-175, gnl|bosTau2|chr21 (46521964-46522137) | |
| 2-175, gnl|Hg17|chr14 (101570105-101570278) | |
| 2-175, gnl|Mm7|chr12 (108174584-108174757) | |
| 301-458, gnl|bosTau2|chr21 (46523888-46524045) | |
| 301-458, gnl|canFam2|chr8 (73097419-73097617) | |
| 301-458, gnl|danRer3|chr8 (31229646-31229806) | |
| 301-458, gnl|dasNov1|scaffold_6554 (55946-56141) | |
| 301-458, gnl|fr1|chrUn (64456935-64457124) | |
| 301-458, gnl|galGal2|chr5 (46272725-46272901) | |
| 301-458, gnl|hg17|chr14 (101572557-101572757) | |
| 301-458, gnl|Hg17|chr14 (101572576-101572733) | |
| 301-458, gnl|loxAfr1|scaffold_54624 (12701-12907) | |
| 301-458, gnl|mm7|chr12 (108175281-108175481) | |
| 301-458, gnl|Mm7|chr12 (108175300-108175457) | |
| 301-458, gnl|monDom2|scaffold_6 (85184915-85185103) | |
| 301-458, gnl|oryCun1|scaffold_129802 (5424-5623) | |
| 301-458, gnl|panTro1|chr15 (102178106-102178306) | |
| 301-458, gnl|rheMac2|chr7 (165328286-165328486) | |
| 301-458, gnl|rn3|chr6 (135386942-135387141) | |
| 301-458, gnl|tetNig1|chr10 (7367769-7367927) | |
| 301-458, gnl|xenTro1|scaffold_178 (1676299-1676479) | |
| 605-756, gnl|bosTau2|chr21 (46524865-46525016) | |
| 605-756, gnl|canFam2|chr8 (73098230-73098426) | |
| 605-756, gnl|dasNov1|scaffold_6554 (56836-57032) | |
| 605-756, gnl|fr1|chrUn (64457413-64457611) | |
| 605-756, gnl|galGal2|chr5 (46273798-46273990) | |
| 605-756, gnl|hg17|chr14 (101574751-101574947) | |
| 605-756, gnl|Hg17|chr14 (101574788-101574939) | |
| 605-756, gnl|loxAfr1|scaffold_54624 (13722-13915) | |
| 605-756, gnl|mm7|chr12 (108176302-108176496) | |
| 605-756, gnl|Mm7|chr12 (108176337-108176488) | |
| 605-756, gnl|monDom2|scaffold_6 (85185825-85186023) | |
| 605-756, gnl|oryCun1|scaffold_129918 (735-538) | |
| 605-756, gnl|panTro1|chr15 (102180299-102180495) | |
| 605-756, gnl|rheMac2|chr7 (165330813-165331009) | |
| 605-756, gnl|rn3|chr6 (135387987-135388180) | |
| 605-756, gnl|tetNig1|chr10 (7368198-7368389) | |
| 605-756, gnl|xenTro1|scaffold_178 (1676743-1676934) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |