Non-Coding RNA Search

Ss1.1-Pig3-SRG8012J06.5

Sequence:


               
               TATGAGTGTAATCATTGTGGAAAATCCTTTGGCACAAGCTCTTACCTTGTAGTCCACAAG
AGAATACACAGTGGGGAGAAACGCTATGAATGCAGTGATTGTGGGAAAGCCTTCAACACA
AGCTCTCAGCTTAAAGTTCACAAGAAAAGACACACTGGAGAGAATCTTCATGAATGCAAT
GACTGTGGGAAAGTGTATAGTGGTCTCTCATCTCTTAGAATGCATCTGAGAACTCATACT
GGGGAGAAACCTTATGAATGTAAAGAATGTAGGAAAACCTTCAGTGTTTCCTCTTCCCTT
AGTAGACATGTGAGAACTCACACTGGAGAAAAACCTTATGAATGTATTCAATGTGGAAAA
CTTTTCAGTCAGAATTCTTCACTTGTTTTACATAAGAGAGTTCATACTAGGAGAGAAAGT
TACAGGAATCCTATAACTTAAAAACGTAGAATTGCCTTTTTCATTGTCTTAAGGTGAATT
CCAAGCCTATTACTTCAGTCTTTGTTCTCTAAAATAAGGATTTAAGGCTATAAACATTCC
TATAAACACCACTTTAGGTATGTAACACACTTTAGTTTGTGATAATTTATTTTAGTTTTG
AGTGTTGTCTAATATTACGACTTCTGATTCTTGGCAGTTTAGAATTATGTATTTTTATGT
TTTCAGTTATCTTATTGATATCTGAGTAAATTGCACTGTGTTCAGAGTATCTGGACAACT
TTACTGGTAATTTCTTGAGAGTTATTTTCTGACCTGGTGTGGCAGATACTGCTCATAGCC
AGTCAAACATCCAGCTCATCCCTCCCTTCTGACAACCTTATATGTCTAGATATAATACCA
AATTGTCTGTTAACAAAACTCCTCTCAGCCTCCCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATGAGTGTAATCATTGTGGAAAATCCTTTGGCACAAGCTCTTACCTTGTAGTCCACAAG
AGAATACACAGTGGGGAGAAACGCTATGAATGCAGTGATTGTGGGAAAGCCTTCAACACA
AGCTCTCAGCTTAAAGTTCACAAGAAAAGACACACTGGAGAGAATCTTCATGAATGCAAT
GACTGTGGGAAAGTGTATAGTGGTCTCTCATCTCTTAGAATGCATCTGAGAACTCATACT
GGGGAGAAACCTTATGAATGTAAAGAATGTAGGAAAACCTTCAGTGTTTCCTCTTCCCTT
AGTAGACATGTGAGAACTCACACTGGAGAAAAACCTTATGAATGTATTCAATGTGGAAAA
CTTTTCAGTCAGAATTCTTCACTTGTTTTACATAAGAGAGTTCATACTAGGAGAGAAAGT
TACAGGAATCCTATAACTTAAAAACGTAGAATTGCCTTTTTCATTGTCTTAAGGTGAATT
CCAAGCCTATTACTTCAGTCTTTGTTCTCTAAAATAAGGATTTAAGGCTATAAACATTCC
TATAAACACCACTTTAGGTATGTAACACACTTTAGTTTGTGATAATTTATTTTAGTTTTG
AGTGTTGTCTAATATTACGACTTCTGATTCTTGGCAGTTTAGAATTATGTATTTTTATGT
TTTCAGTTATCTTATTGATATCTGAGTAAATTGCACTGTGTTCAGAGTATCTGGACAACT
TTACTGGTAATTTCTTGAGAGTTATTTTCTGACCTGGTGTGGCAGATACTGCTCATAGCC
AGTCAAACATCCAGCTCATCCCTCCCTTCTGACAACCTTATATGTCTAGATATAATACCA
AATTGTCTGTTAACAAAACTCCTCTCAGCCTCCCAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|51471029|ref|XP_495940.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|51471029|ref|XP_495940.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-429, gnl|bosTau2|chr10 (8996417-8995991)
               

               
               1-429, gnl|Hg17|chr19 (42818222-42817755)
               

               
               1-429, gnl|Mm7|chr2 (127309848-127309506)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-429, gnl|bosTau2|chr10 (8996417-8995991)
               

               
               1-429, gnl|Hg17|chr19 (42818222-42817755)
               

               
               1-429, gnl|Mm7|chr2 (127309848-127309506)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               aor (0.195274)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)

	1-429, gnl\|bosTau2\|chr10 (8996417-8995991)
	1-429, gnl\|Hg17\|chr19 (42818222-42817755)
	1-429, gnl\|Mm7\|chr2 (127309848-127309506)