Non-Coding RNA Search

Ss1.1-Pig3-SRG8012L08.5

Sequence:


               
               TTGTTTTTGTTTTTTTTTTTAATCAAGAAAGTTTCAGGGAATCAAAAGAGGTCGGACATT
TTTTAACCTAGCAGAAGTACAGAGTCATATATTTTGCTACAAATCTTATAGTATGGGAAA
TCCACTTTGCCCGTATAGTGTGTGGAAAGTGTGTGTGTGTCTGTGCTCATGATAACTTGA
ATGTTGAACCAGCCCTAATGGCTTCAGGGTAGCATCTTTGAAAGATAAACCACACGGCTT
CAGGAAACTTTCTCCAAATACTACTTGGTTATCCGTTCCCGTAAGTTTTAAAGGGTGTTG
AGGGTGAACACACTGGGATGGGATATTCTGTTGATGACATGCCGGGCATTTTGGCGTGAG
ATGAGGGCAGAAGCAAGATGTTGTCCTTCTCAGTGATTTGACGCGTGGCAGTCCTCATTC
CACTCTCTCTTTCATTCCCCATGGTTCTGCCCATACTCTCTTTTTGAAACTCTTGTTTCT
TTTGCTCTTTCCTGGAGCTTCACCTCTCTTCTTACATATTTTAGCGTTTTATAAATCTAC
CAATGAAAGGTCCCCTCTGTCACCAGGTGGCACCACCCTTTGGTTTGCTGTGGTACTTTG
CTGTGTTCTCTGTGGCATCATGTTACTGTGTAAATAAATTCATTTTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGTTTTTGTTTTTTTTTTTAATCAAGAAAGTTTCAGGGAATCAAAAGAGGTCGGACATT
TTTTAACCTAGCAGAAGTACAGAGTCATATATTTTGCTACAAATCTTATAGTATGGGAAA
TCCACTTTGCCCGTATAGTGTGTGGAAAGTGTGTGTGTGTCTGTGCTCATGATAACTTGA
ATGTTGAACCAGCCCTAATGGCTTCAGGGTAGCATCTTTGAAAGATAAACCACACGGCTT
CAGGAAACTTTCTCCAAATACTACTTGGTTATCCGTTCCCGTAAGTTTTAAAGGGTGTTG
AGGGTGAACACACTGGGATGGGATATTCTGTTGATGACATGCCGGGCATTTTGGCGTGAG
ATGAGGGCAGAAGCAAGATGTTGTCCTTCTCAGTGATTTGACGCGTGGCAGTCCTCATTC
CACTCTCTCTTTCATTCCCCATGGTTCTGCCCATACTCTCTTTTTGAAACTCTTGTTTCT
TTTGCTCTTTCCTGGAGCTTCACCTCTCTTCTTACATATTTTAGCGTTTTATAAATCTAC
CAATGAAAGGTCCCCTCTGTCACCAGGTGGCACCACCCTTTGGTTTGCTGTGGTACTTTG
CTGTGTTCTCTGTGGCATCATGTTACTGTGTAAATAAATTCATTTTCA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               10-648, gnl|bosTau2|chr21 (21591486-21590850)
               

               
               10-648, gnl|Hg17|chr15 (75188200-75187569)
               

               
               10-648, gnl|Mm7|chr9 (56229434-56228805)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-648, gnl|bosTau2|chr21 (21591486-21590850)
               

               
               10-648, gnl|Hg17|chr15 (75188200-75187569)
               

               
               10-648, gnl|Mm7|chr9 (56229434-56228805)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               clu (1.3161)
               

               
               col (0.195008)
               

               
               sin (0.174948)
               

               
               eru (0.120048)
               

               
               ldo (0.0970026)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (1.3161)
               

               
               col (0.195008)
               

               
               sin (0.174948)
               

               
               eru (0.120048)
               

               
               ldo (0.0970026)

	10-648, gnl\|bosTau2\|chr21 (21591486-21590850)
	10-648, gnl\|Hg17\|chr15 (75188200-75187569)
	10-648, gnl\|Mm7\|chr9 (56229434-56228805)

	clu (1.3161)
	col (0.195008)
	sin (0.174948)
	eru (0.120048)
	ldo (0.0970026)