Non-Coding RNA Search

Ss1.1-Pig3-SRG8013C17.3

Sequence:


               
               CAGCTGTAAATAGCAATAATGAAATTATTGTTACAGATTTCCATAATCATTCTGTCAAGG
TGTTTAATCAGGAAGGAGAATTCATGTTGAAGTTTGGCTCGAATGGAGAAGGAAATGGGC
AGTTTAATGCCCCCACGGGGGTAGCGGTGGATTCAAATGGAAACATCATCGTAGCTGACT
GGGGCAACAGCAGGATCCAGGTTTTTGATGGAAGCGGATCGTTTTTGTCCTACATTAACA
CCTCTGCTGACCCACTATACGGCCCCCAAGGCCTGGCTCTCACTTCAGACGGCCACGTGG
TGGTTGCAGACTCTGGAAACCACTGTTTCAAGGTCTATCGGTACCTTCAGTAACAGTGGG
CAGCTGGACACCCCCTTACAAAGTTCTTACCCTAGAAACTGGAATGGATTTCTCGACGCA
GGACCAGATGATACTAGACTTTACGTACTGGAAGGAATCATCGTGAACTTTCCAAGGTCA
TTTCTGAATGTAACGATTTCCTTAAAAAAACTGCATATCTGATTTCTGTAATCCACACTT
AGGGTTGAAGAAAAAGAAATCTCTTCTACTGAATCTGTAAAAAAACAAAACAAAAAACTG
CAAAGTTTTACTCCTGTGGACTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGCTGTAAATAGCAATAATGAAATTATTGTTACAGATTTCCATAATCATTCTGTCAAGG
TGTTTAATCAGGAAGGAGAATTCATGTTGAAGTTTGGCTCGAATGGAGAAGGAAATGGGC
AGTTTAATGCCCCCACGGGGGTAGCGGTGGATTCAAATGGAAACATCATCGTAGCTGACT
GGGGCAACAGCAGGATCCAGGTTTTTGATGGAAGCGGATCGTTTTTGTCCTACATTAACA
CCTCTGCTGACCCACTATACGGCCCCCAAGGCCTGGCTCTCACTTCAGACGGCCACGTGG
TGGTTGCAGACTCTGGAAACCACTGTTTCAAGGTCTATCGGTACCTTCAGTAACAGTGGG
CAGCTGGACACCCCCTTACAAAGTTCTTACCCTAGAAACTGGAATGGATTTCTCGACGCA
GGACCAGATGATACTAGACTTTACGTACTGGAAGGAATCATCGTGAACTTTCCAAGGTCA
TTTCTGAATGTAACGATTTCCTTAAAAAAACTGCATATCTGATTTCTGTAATCCACACTT
AGGGTTGAAGAAAAAGAAATCTCTTCTACTGAATCTGTAAAAAAACAAAACAAAAAACTG
CAAAGTTTTACTCCTGTGGACTAT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|61846255|ref|XP_581514.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|61846255|ref|XP_581514.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               51-202, gnl|bosTau2|chr15 (28721049-28720899)
               

               
               51-202, gnl|Hg17|chr11 (6427260-6427110)
               

               
               51-202, gnl|Mm7|chr7 (101667898-101667748)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               51-202, gnl|bosTau2|chr15 (28721049-28720899)
               

               
               51-202, gnl|Hg17|chr11 (6427260-6427110)
               

               
               51-202, gnl|Mm7|chr7 (101667898-101667748)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               fce (0.271592)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)

	51-202, gnl\|bosTau2\|chr15 (28721049-28720899)
	51-202, gnl\|Hg17\|chr11 (6427260-6427110)
	51-202, gnl\|Mm7\|chr7 (101667898-101667748)