Non-Coding RNA Search

Ss1.1-Pig3-SRG8013C24.5

Sequence:


               
               TGCATATTGGTACACCAGCTACCCACGCATCCCGATTCCTGACCAGGACCTTTCCACGCT
GGTTTAAATGAATGACAGACATTTCTGGGAGACTGTTTGGGAAAGACCTGGACCCTCTCA
TTTGAAGGTCCCACCTGGCGGCCGGCATCCTTCCGCACTCCGGGCCCCGTCCTGGGAGCT
GAGATACAGGGGGGGGATCAAGGCTGACTTTGTCCCCGCCCTCAGAACTCATAGCCTAAT
TGAGGGGGAGGGCAGTTCGAATCCAGTGTAATTGTGCTGTGATGGGTGGTCCTCATGGGG
CTGGAGGAGGCCTTCATGGAGGAGGTGGTGCCCGGACTGGTATGGAACGAAGAGCAGGAG
CCTGCCGGCAGCCGGGCCCTCAATGGCCTCTCCCCTCTCCAGGAGCAGCGGTCGGCAGTG
TTCGTGATCCTCTTTGCCCTCATCACCATCCTCATCCTCTACAGCTCCAACAGCGCCAAT
GAGGTCTTTCATTACGGCTCCCAGCTGGGCCGCACCCGCCGGCCCGTCAACCTCAAGAAA
TGGAGCATCACCGACGGCTACGTCCCCCTGCTCGGCAACAAGACACTGCCCTCCCGGTGC
CACCCAGTGTGTGATTGTCACCAGCTCTAGCCACCTGCTGGGCACCAAGCTGGGCCCCGA
GATCGAGCGGGCCGAGTGCACGATCCGCATGAATGACGCACCCACCACGGGCTACTCAGC
CGATGTGGGCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCATATTGGTACACCAGCTACCCACGCATCCCGATTCCTGACCAGGACCTTTCCACGCT
GGTTTAAATGAATGACAGACATTTCTGGGAGACTGTTTGGGAAAGACCTGGACCCTCTCA
TTTGAAGGTCCCACCTGGCGGCCGGCATCCTTCCGCACTCCGGGCCCCGTCCTGGGAGCT
GAGATACAGGGGGGGGATCAAGGCTGACTTTGTCCCCGCCCTCAGAACTCATAGCCTAAT
TGAGGGGGAGGGCAGTTCGAATCCAGTGTAATTGTGCTGTGATGGGTGGTCCTCATGGGG
CTGGAGGAGGCCTTCATGGAGGAGGTGGTGCCCGGACTGGTATGGAACGAAGAGCAGGAG
CCTGCCGGCAGCCGGGCCCTCAATGGCCTCTCCCCTCTCCAGGAGCAGCGGTCGGCAGTG
TTCGTGATCCTCTTTGCCCTCATCACCATCCTCATCCTCTACAGCTCCAACAGCGCCAAT
GAGGTCTTTCATTACGGCTCCCAGCTGGGCCGCACCCGCCGGCCCGTCAACCTCAAGAAA
TGGAGCATCACCGACGGCTACGTCCCCCTGCTCGGCAACAAGACACTGCCCTCCCGGTGC
CACCCAGTGTGTGATTGTCACCAGCTCTAGCCACCTGCTGGGCACCAAGCTGGGCCCCGA
GATCGAGCGGGCCGAGTGCACGATCCGCATGAATGACGCACCCACCACGGGCTACTCAGC
CGATGTGGGCAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55958259|emb|CAI12610.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55958259|emb|CAI12610.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               404-719, gnl|bosTau2|chr22 (11410922-11410610)
               

               
               404-719, gnl|Hg17|chr9 (127736523-127732741)
               

               
               404-719, gnl|Mm7|chr2 (32619536-32622227)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               404-719, gnl|bosTau2|chr22 (11410922-11410610)
               

               
               404-719, gnl|Hg17|chr9 (127736523-127732741)
               

               
               404-719, gnl|Mm7|chr2 (32619536-32622227)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.119646)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	404-719, gnl\|bosTau2\|chr22 (11410922-11410610)
	404-719, gnl\|Hg17\|chr9 (127736523-127732741)
	404-719, gnl\|Mm7\|chr2 (32619536-32622227)