Ss1.1-Pig3-SRG8013F22.5
|
CGGCCCTCTAGCCCCGTCACCTCCCACATCTCCAAGGTGCTGTTTGGAGAGGACGACAGC
TTGCTGCGTGTTGACTGCATACGCTACAATCGCGCTGTACGTGACCTGGGTCCTGTTATA
AGCACAGGCCTGCTGCACCTGGCTGAGGATGGCGTGCTGAGTCCCCTAGCACTGACAGAG
AGTGGGAAGGGTTCCTCCCCTTCTGTCAGACTGAGCCAAAGCAGCCATGGGTCTGGCAGC
CCGGAGGAGAAGGACATGGTAGAAGCTATGGATGGCAGAGAGAAGCCTGGGTTGGTCAGG
CCTGGCGAGCCTTTGAGTGGGGAGAAGTATTCACCCAAGGAGCTGCTGGCATTGCTGAAG
TGTGTGGAAGCTGAGATCGCAAACTATGAGGCCTGCCTCAAGGAAGAAGTGGAGAAGAGG
AAGAAGTTCAAGATTGACGACCAGAGAAGGACTCACAACTACGATGAGTTCATCTGCACC
TTCATCTCCATGCTGGCTCATGAAGGCATGCTGGCCAACCTAGTGGAGCAGAACATCTCA
GTGCGGCGGCGCCAGGGTGTCAGCATTGGTCGGCTCCACAAGCAGCGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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CGGCCCTCTAGCCCCGTCACCTCCCACATCTCCAAGGTGCTGTTTGGAGAGGACGACAGC
TTGCTGCGTGTTGACTGCATACGCTACAATCGCGCTGTACGTGACCTGGGTCCTGTTATA
AGCACAGGCCTGCTGCACCTGGCTGAGGATGGCGTGCTGAGTCCCCTAGCACTGACAGAG
AGTGGGAAGGGTTCCTCCCCTTCTGTCAGACTGAGCCAAAGCAGCCATGGGTCTGGCAGC
CCGGAGGAGAAGGACATGGTAGAAGCTATGGATGGCAGAGAGAAGCCTGGGTTGGTCAGG
CCTGGCGAGCCTTTGAGTGGGGAGAAGTATTCACCCAAGGAGCTGCTGGCATTGCTGAAG
TGTGTGGAAGCTGAGATCGCAAACTATGAGGCCTGCCTCAAGGAAGAAGTGGAGAAGAGG
AAGAAGTTCAAGATTGACGACCAGAGAAGGACTCACAACTACGATGAGTTCATCTGCACC
TTCATCTCCATGCTGGCTCATGAAGGCATGCTGGCCAACCTAGTGGAGCAGAACATCTCA
GTGCGGCGGCGCCAGGGTGTCAGCATTGGTCGGCTCCACAAGCAGCGG
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
176-340, gnl|bosTau2|chr22 (36987818-36987654) |
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176-340, gnl|canFam2|chr20 (40357815-40357637) |
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176-340, gnl|danRer3|chr6 (30703598-30703801) |
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176-340, gnl|dasNov1|scaffold_94102 (201-386) |
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176-340, gnl|echTel1|scaffold_295684 (9192-9016) |
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176-340, gnl|galGal2|chr12 (2766643-2766838) |
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176-340, gnl|hg17|chr3 (52412159-52412338) |
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176-340, gnl|Hg17|chr3 (52412357-52412193) |
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176-340, gnl|loxAfr1|scaffold_12994 (13243-13426) |
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176-340, gnl|mm7|chr14 (28687715-28687546) |
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176-340, gnl|Mm7|chr14 (28687525-28687689) |
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176-340, gnl|monDom2|scaffold_5 (70721820-70721662) |
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176-340, gnl|oryCun1|scaffold_198307 (86017-85841) |
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176-340, gnl|panTro1|chr2 (54027645-54027824) |
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176-340, gnl|rheMac2|chr2 (83977801-83977622) |
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176-340, gnl|rn3|chr16 (6691367-6691195) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
176-340, gnl|bosTau2|chr22 (36987818-36987654) |
|
176-340, gnl|canFam2|chr20 (40357815-40357637) |
|
176-340, gnl|danRer3|chr6 (30703598-30703801) |
|
176-340, gnl|dasNov1|scaffold_94102 (201-386) |
|
176-340, gnl|echTel1|scaffold_295684 (9192-9016) |
|
176-340, gnl|galGal2|chr12 (2766643-2766838) |
|
176-340, gnl|hg17|chr3 (52412159-52412338) |
|
176-340, gnl|Hg17|chr3 (52412357-52412193) |
|
176-340, gnl|loxAfr1|scaffold_12994 (13243-13426) |
|
176-340, gnl|mm7|chr14 (28687715-28687546) |
|
176-340, gnl|Mm7|chr14 (28687525-28687689) |
|
176-340, gnl|monDom2|scaffold_5 (70721820-70721662) |
|
176-340, gnl|oryCun1|scaffold_198307 (86017-85841) |
|
176-340, gnl|panTro1|chr2 (54027645-54027824) |
|
176-340, gnl|rheMac2|chr2 (83977801-83977622) |
|
176-340, gnl|rn3|chr16 (6691367-6691195) |
