Ss1.1-Pig3-SRG8013G20.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGTTTGAAGCCTCAAGCTTCCGAGAGGACTCCCTGCCTGCCTCGGAGCTGTCTCCTGTCG CTCCACAGACAGTCCGGTGATCCAGGACATGCCCCAGCTCTGGTGATGCAGATTGCCTTT CTGCTCCTGGAACCTCATCTGTGCCTCAGACTTTCTCCTCTCAGCCTGAGCCTGCGTGGA AACTGGGATGTGGGAAGCAGGAAGCAGAGCTAGTGGTAACTGAGAGGCCCATGTCTGGGT AGAACCAGGCCCAGGACCACGAGGCTGCCTCCCCCCTGGCCTGGATTCAGCTGCTGTGGC TCTGCTGATGTGCTCAGCACCATCCTTCTATTTGTACTTAAATGGCACAGCATTTGGTCA GCGTATCTGAAAAGGAAGGTGTGAGAGACAAAGCCCATGGCCACCTACCCCTGCCAATTA TGTGGCAAGACGTTCCTCACCCTGGAGAAGTTCACTATCCACAATTATTCCCACTCCAGG GAGCGACCTTACAAGTGCTTGCAGCCAGACTGTGGCAAAGCCTTCATTTCCAGATATAAA TTAATGAGGCACATGGCTACCCATTCACCCCAGAAATCTCACCAGTGCGCTCATTGTGAG AAGACTTTCAACCGGAAAGACCACCTGAAAAACCACCTCCAAACCCACGACCCCAACAAA ATGGCCTTTGGGTGTGAGGAGTGTGGGAAGAAGTACAACACCATGCTGGGCTACAAGAGG CACCTGGCCCTCCACGCGGCCAGCAGCGGCGACCTCACCTGCGGGGTCTGCGCCCTGGAG CTAGGGAGCACAGAGGTGCTGCTGGACCACCTCAAAGCCCACGCGGAAGAAAAGCCCCCT AGTGGAACCAAGGAAAAGAAGCACCAGTGCGACCACTGCGAGAGATGCTTCTACACCCGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGTTTGAAGCCTCAAGCTTCCGAGAGGACTCCCTGCCTGCCTCGGAGCTGTCTCCTGTCG CTCCACAGACAGTCCGGTGATCCAGGACATGCCCCAGCTCTGGTGATGCAGATTGCCTTT CTGCTCCTGGAACCTCATCTGTGCCTCAGACTTTCTCCTCTCAGCCTGAGCCTGCGTGGA AACTGGGATGTGGGAAGCAGGAAGCAGAGCTAGTGGTAACTGAGAGGCCCATGTCTGGGT AGAACCAGGCCCAGGACCACGAGGCTGCCTCCCCCCTGGCCTGGATTCAGCTGCTGTGGC TCTGCTGATGTGCTCAGCACCATCCTTCTATTTGTACTTAAATGGCACAGCATTTGGTCA GCGTATCTGAAAAGGAAGGTGTGAGAGACAAAGCCCATGGCCACCTACCCCTGCCAATTA TGTGGCAAGACGTTCCTCACCCTGGAGAAGTTCACTATCCACAATTATTCCCACTCCAGG GAGCGACCTTACAAGTGCTTGCAGCCAGACTGTGGCAAAGCCTTCATTTCCAGATATAAA TTAATGAGGCACATGGCTACCCATTCACCCCAGAAATCTCACCAGTGCGCTCATTGTGAG AAGACTTTCAACCGGAAAGACCACCTGAAAAACCACCTCCAAACCCACGACCCCAACAAA ATGGCCTTTGGGTGTGAGGAGTGTGGGAAGAAGTACAACACCATGCTGGGCTACAAGAGG CACCTGGCCCTCCACGCGGCCAGCAGCGGCGACCTCACCTGCGGGGTCTGCGCCCTGGAG CTAGGGAGCACAGAGGTGCTGCTGGACCACCTCAAAGCCCACGCGGAAGAAAAGCCCCCT AGTGGAACCAAGGAAAAGAAGCACCAGTGCGACCACTGCGAGAGATGCTTCTACACCCGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 547-899, gnl|bosTau2|chr13 (42344218-42344567) | |
| 547-899, gnl|canFam2|chr24 (24568794-24569150) | |
| 547-899, gnl|canFam2|chr24 (24569149-24568794) | |
| 547-899, gnl|danRer3|chr15 (28233015-28232659) | |
| 547-899, gnl|danRer3|chr15 (28232660-28233015) | |
| 547-899, gnl|dasNov1|scaffold_14052 (1944-1613) | |
| 547-899, gnl|dasNov1|scaffold_14052 (1621-1944) | |
| 547-899, gnl|echTel1|scaffold_316323 (18894-19249) | |
| 547-899, gnl|echTel1|scaffold_316323 (19248-18894) | |
| 547-899, gnl|fr1|chrUn (272043479-272043123) | |
| 547-899, gnl|fr1|chrUn (272043124-272043479) | |
| 547-899, gnl|galGal2|chr20 (9704391-9704747) | |
| 547-899, gnl|galGal2|chr20 (9704746-9704391) | |
| 547-899, gnl|hg17|chr20 (30248794-30249150) | |
| 547-899, gnl|Hg17|chr20 (30249148-30248799) | |
| 547-899, gnl|hg17|chr4 (85522591-85522945) | |
| 547-899, gnl|loxAfr1|scaffold_27064 (14283-13927) | |
| 547-899, gnl|loxAfr1|scaffold_27064 (13928-14283) | |
| 547-899, gnl|mm7|chr2 (152973224-152973580) | |
| 547-899, gnl|mm7|chr2 (152973576-152973224) | |
| 547-899, gnl|Mm7|chr2 (152973578-152973229) | |
| 547-899, gnl|monDom2|scaffold_38 (858704-858348) | |
| 547-899, gnl|monDom2|scaffold_38 (858349-858704) | |
| 547-899, gnl|oryCun1|scaffold_191471 (21635-21991) | |
| 547-899, gnl|oryCun1|scaffold_191471 (21987-21635) | |
| 547-899, gnl|panTro1|chr21 (31944828-31945184) | |
| 547-899, gnl|panTro1|chr3 (48162293-48161939) | |
| 547-899, gnl|rheMac2|chr10 (32379002-32378646) | |
| 547-899, gnl|rheMac2|chr10 (32378650-32379002) | |
| 547-899, gnl|rn3|chr3 (143489112-143489468) | |
| 547-899, gnl|rn3|chr3 (143489464-143489112) | |
| 547-899, gnl|tetNig1|chrUn_random (109849569-109849213) | |
| 547-899, gnl|tetNig1|chrUn_random (109849214-109849569) | |
| 547-899, gnl|xenTro1|scaffold_8 (2787532-2787887) | |
| 547-899, gnl|xenTro1|scaffold_8 (2787887-2787532) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 547-899, gnl|bosTau2|chr13 (42344218-42344567) | |
| 547-899, gnl|canFam2|chr24 (24568794-24569150) | |
| 547-899, gnl|canFam2|chr24 (24569149-24568794) | |
| 547-899, gnl|danRer3|chr15 (28233015-28232659) | |
| 547-899, gnl|danRer3|chr15 (28232660-28233015) | |
| 547-899, gnl|dasNov1|scaffold_14052 (1944-1613) | |
| 547-899, gnl|dasNov1|scaffold_14052 (1621-1944) | |
| 547-899, gnl|echTel1|scaffold_316323 (18894-19249) | |
| 547-899, gnl|echTel1|scaffold_316323 (19248-18894) | |
| 547-899, gnl|fr1|chrUn (272043479-272043123) | |
| 547-899, gnl|fr1|chrUn (272043124-272043479) | |
| 547-899, gnl|galGal2|chr20 (9704391-9704747) | |
| 547-899, gnl|galGal2|chr20 (9704746-9704391) | |
| 547-899, gnl|hg17|chr20 (30248794-30249150) | |
| 547-899, gnl|Hg17|chr20 (30249148-30248799) | |
| 547-899, gnl|hg17|chr4 (85522591-85522945) | |
| 547-899, gnl|loxAfr1|scaffold_27064 (14283-13927) | |
| 547-899, gnl|loxAfr1|scaffold_27064 (13928-14283) | |
| 547-899, gnl|mm7|chr2 (152973224-152973580) | |
| 547-899, gnl|mm7|chr2 (152973576-152973224) | |
| 547-899, gnl|Mm7|chr2 (152973578-152973229) | |
| 547-899, gnl|monDom2|scaffold_38 (858704-858348) | |
| 547-899, gnl|monDom2|scaffold_38 (858349-858704) | |
| 547-899, gnl|oryCun1|scaffold_191471 (21635-21991) | |
| 547-899, gnl|oryCun1|scaffold_191471 (21987-21635) | |
| 547-899, gnl|panTro1|chr21 (31944828-31945184) | |
| 547-899, gnl|panTro1|chr3 (48162293-48161939) | |
| 547-899, gnl|rheMac2|chr10 (32379002-32378646) | |
| 547-899, gnl|rheMac2|chr10 (32378650-32379002) | |
| 547-899, gnl|rn3|chr3 (143489112-143489468) | |
| 547-899, gnl|rn3|chr3 (143489464-143489112) | |
| 547-899, gnl|tetNig1|chrUn_random (109849569-109849213) | |
| 547-899, gnl|tetNig1|chrUn_random (109849214-109849569) | |
| 547-899, gnl|xenTro1|scaffold_8 (2787532-2787887) | |
| 547-899, gnl|xenTro1|scaffold_8 (2787887-2787532) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |