Non-Coding RNA Search

Ss1.1-Pig3-SRG8013H10.5

Sequence:


               
               CTTAATTCTGCTCTAATCCTTCCACAGGCCTTTCAGTTTTTTGAAGAAAGCTCCTCCCCA
GTCCCACCACATGACTTCTAGACCCTTCCCATCTTTGTCTCAAATGTCAGGTGTTAGAAC
CAGTCGTCATACACAAAATTTTGTTCCACAGGATTGGGGGAGAGCATTTCCTATTAGAAA
CCAAGTTGTTTTCCCAAGAGATAAACTGTGTTCACTAGACTACTCCAGCTTCATCAGTCC
AGAGAGGTAAGACTGCCTGGTCTGTATTAGCACAGCTTGTCTCTGAAACTTTTCTCACAA
AGGCCACATACTGTTCAGCAGACTATTTCAGTCATCCCAAATACTTTTCAGAACTCTTGG
GTAGATGCATTGTAACTCCAGAAATGTATCTACCTGTTTTCTGATCATCTTGATTATAAT
ATTTGGAGAATTATACTATTTAGAGAATTAACTACCTTTAACTATCTTATCCATTTTANG
AGCAATTTGGAATGAAAATTTTTCTTAAAAACAAAAAACTGTCTATAATGTCCTTTCTGC
CCTTGCTGTACCTTTTGGGGCCTCTCATTAAGAGCTTCTGTAAGAGCTAATATTGGTGGC
TAAGTTTCCTTTCTATAAATGTGGTCTTAAGACATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTAATTCTGCTCTAATCCTTCCACAGGCCTTTCAGTTTTTTGAAGAAAGCTCCTCCCCA
GTCCCACCACATGACTTCTAGACCCTTCCCATCTTTGTCTCAAATGTCAGGTGTTAGAAC
CAGTCGTCATACACAAAATTTTGTTCCACAGGATTGGGGGAGAGCATTTCCTATTAGAAA
CCAAGTTGTTTTCCCAAGAGATAAACTGTGTTCACTAGACTACTCCAGCTTCATCAGTCC
AGAGAGGTAAGACTGCCTGGTCTGTATTAGCACAGCTTGTCTCTGAAACTTTTCTCACAA
AGGCCACATACTGTTCAGCAGACTATTTCAGTCATCCCAAATACTTTTCAGAACTCTTGG
GTAGATGCATTGTAACTCCAGAAATGTATCTACCTGTTTTCTGATCATCTTGATTATAAT
ATTTGGAGAATTATACTATTTAGAGAATTAACTACCTTTAACTATCTTATCCATTTTANG
AGCAATTTGGAATGAAAATTTTTCTTAAAAACAAAAAACTGTCTATAATGTCCTTTCTGC
CCTTGCTGTACCTTTTGGGGCCTCTCATTAAGAGCTTCTGTAAGAGCTAATATTGGTGGC
TAAGTTTCCTTTCTATAAATGTGGTCTTAAGACATG

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               155-442, gnl|bosTau2|chr10 (60547205-60546921)
               

               
               155-442, gnl|Hg17|chr14 (73501104-73500858)
               


               
               458-623, gnl|bosTau2|chr10 (60546932-60546772)
               

               
               458-623, gnl|Hg17|chr14 (73500869-73500733)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               155-442, gnl|bosTau2|chr10 (60547205-60546921)
               

               
               155-442, gnl|Hg17|chr14 (73501104-73500858)
               


               
               458-623, gnl|bosTau2|chr10 (60546932-60546772)
               

               
               458-623, gnl|Hg17|chr14 (73500869-73500733)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               col (0.195008)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               col (0.195008)

	155-442, gnl\|bosTau2\|chr10 (60547205-60546921)
	155-442, gnl\|Hg17\|chr14 (73501104-73500858)

	458-623, gnl\|bosTau2\|chr10 (60546932-60546772)
	458-623, gnl\|Hg17\|chr14 (73500869-73500733)