Ss1.1-Pig3-SRG8013I03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAATTGCTCCTGGAGCGCTATCCCGAGTGCGGGAACCTATTGCTGCGGCCCAGCGGAGAC GGCACCGGCGCCTTGTCGGTCACTACACGCCAGACGCTCAACGGGACTCCGGTGGTCCGG CACTACAAGGTGAAGCGCGAGGGCCTCAAGTACGTGATCGATGTGGAGGAGCCGTTCTCC TGCACCTCAATCGATGCAGTAGTCAACTATTTCGTGTCGCATACCAATAAGGCTCTGGTG CCCTTCCTGCTGGATGAGGACTATGAGAAAGTGATAGGCTACGTGGAGGCGGATAAAGAG AATGGCGAAAGTGTGTGGGTGGCGCCCTCGGCCTCCTCTGCCTCCTTGGTCCCCGGCCCA GGTCCTGCACCCCCCAAAGGTGGCCCTAAGCAGCTGCCTCCCATGCCTGTGTCCAGCCAG GACAAGCTGCCCCCGCTCCTGCACCAGGACGAGAACTATGTGATCCCCATTGGAGACACT CCAGCTGCAAACTACATGAATGAGGACGTGCCTTCCCCTAGTCGGCCAGTTGTTCTGAAG CCCAAGAAGCTGGCCAAGTTTCAGGCAAAGCCTCCAAAACCGCCCAGTGTGCCCAGGCCA GAGCCCAAAGTCCTCCACAGTGGCCTGGCCAGGAAGCTGGCAGTCAGCTCAGCACAGGCT TTCTTCCCCACAACAGGGTTGGCAGACATGACAGCAGAGCTGGAAGAGAAACTGCAGAGG AGGCGGGCACTGGAGGAGGCAGCTGGGCGCACGGGGGACCAGCAGGCCAGTCTCCAAGCA TGGCACCACAGCCAGACAGATCCCTCCTCTAAGAATTAAAACCCAAGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAATTGCTCCTGGAGCGCTATCCCGAGTGCGGGAACCTATTGCTGCGGCCCAGCGGAGAC GGCACCGGCGCCTTGTCGGTCACTACACGCCAGACGCTCAACGGGACTCCGGTGGTCCGG CACTACAAGGTGAAGCGCGAGGGCCTCAAGTACGTGATCGATGTGGAGGAGCCGTTCTCC TGCACCTCAATCGATGCAGTAGTCAACTATTTCGTGTCGCATACCAATAAGGCTCTGGTG CCCTTCCTGCTGGATGAGGACTATGAGAAAGTGATAGGCTACGTGGAGGCGGATAAAGAG AATGGCGAAAGTGTGTGGGTGGCGCCCTCGGCCTCCTCTGCCTCCTTGGTCCCCGGCCCA GGTCCTGCACCCCCCAAAGGTGGCCCTAAGCAGCTGCCTCCCATGCCTGTGTCCAGCCAG GACAAGCTGCCCCCGCTCCTGCACCAGGACGAGAACTATGTGATCCCCATTGGAGACACT CCAGCTGCAAACTACATGAATGAGGACGTGCCTTCCCCTAGTCGGCCAGTTGTTCTGAAG CCCAAGAAGCTGGCCAAGTTTCAGGCAAAGCCTCCAAAACCGCCCAGTGTGCCCAGGCCA GAGCCCAAAGTCCTCCACAGTGGCCTGGCCAGGAAGCTGGCAGTCAGCTCAGCACAGGCT TTCTTCCCCACAACAGGGTTGGCAGACATGACAGCAGAGCTGGAAGAGAAACTGCAGAGG AGGCGGGCACTGGAGGAGGCAGCTGGGCGCACGGGGGACCAGCAGGCCAGTCTCCAAGCA TGGCACCACAGCCAGACAGATCCCTCCTCTAAGAATTAAAACCCAAGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 1-105, gnl|bosTau2|chr7 (14999485-14999381) | |
| 1-105, gnl|canFam2|chr20 (58277433-58277293) | |
| 1-105, gnl|danRer3|chr8 (10181287-10181157) | |
| 1-105, gnl|echTel1|scaffold_235075 (3265-3121) | |
| 1-105, gnl|fr1|chrUn (199789421-199789281) | |
| 1-105, gnl|hg17|chr19 (4279655-4279798) | |
| 1-105, gnl|Hg17|chr19 (4279775-4279671) | |
| 1-105, gnl|mm7|chr17 (54159992-54160132) | |
| 1-105, gnl|Mm7|chr17 (54160109-54160005) | |
| 1-105, gnl|monDom2|scaffold_85 (1137093-1137227) | |
| 1-105, gnl|rn3|chrUn (25764450-25764301) | |
| 1-105, gnl|tetNig1|chr1_random (3110245-3110370) | |
| 1-105, gnl|xenTro1|scaffold_1238 (218077-217965) | |
| 174-278, gnl|bosTau2|chr7 (14998904-14998800) | |
| 174-278, gnl|canFam2|chr20 (58278369-58278297) | |
| 174-278, gnl|danRer3|chr8 (10184707-10184635) | |
| 174-278, gnl|echTel1|scaffold_58380 (656-584) | |
| 174-278, gnl|fr1|chrUn (199790052-199789976) | |
| 174-278, gnl|hg17|chr19 (4278120-4278192) | |
| 174-278, gnl|Hg17|chr19 (4278224-4278120) | |
| 174-278, gnl|mm7|chr17 (54159438-54159510) | |
| 174-278, gnl|Mm7|chr17 (54159542-54159438) | |
| 174-278, gnl|monDom2|scaffold_85 (1136461-1136533) | |
| 174-278, gnl|panTro1|chr20 (4562378-4562450) | |
| 174-278, gnl|rn3|chrUn (25765045-25764972) | |
| 174-278, gnl|tetNig1|chr1_random (3109629-3109692) | |
| 174-278, gnl|xenTro1|scaffold_702 (407832-407776) | |
| 358-506, gnl|bosTau2|chr7 (14997366-14997209) | |
| 358-506, gnl|canFam2|chr20 (58279839-58279503) | |
| 358-506, gnl|hg17|chr19 (4276231-4276567) | |
| 358-506, gnl|Hg17|chr19 (4276546-4276395) | |
| 358-506, gnl|loxAfr1|scaffold_130654 (518-155) | |
| 358-506, gnl|mm7|chr17 (54157076-54157428) | |
| 358-506, gnl|Mm7|chr17 (54157408-54157233) | |
| 358-506, gnl|monDom2|scaffold_85 (1134329-1134681) | |
| 358-506, gnl|rn3|chrUn (25766947-25766594) | |
| 674-827, gnl|bosTau2|chr7 (14996642-14996489) | |
| 674-827, gnl|Hg17|chr19 (4275197-4275051) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-105, gnl|bosTau2|chr7 (14999485-14999381) | |
| 1-105, gnl|canFam2|chr20 (58277433-58277293) | |
| 1-105, gnl|danRer3|chr8 (10181287-10181157) | |
| 1-105, gnl|echTel1|scaffold_235075 (3265-3121) | |
| 1-105, gnl|fr1|chrUn (199789421-199789281) | |
| 1-105, gnl|hg17|chr19 (4279655-4279798) | |
| 1-105, gnl|Hg17|chr19 (4279775-4279671) | |
| 1-105, gnl|mm7|chr17 (54159992-54160132) | |
| 1-105, gnl|Mm7|chr17 (54160109-54160005) | |
| 1-105, gnl|monDom2|scaffold_85 (1137093-1137227) | |
| 1-105, gnl|rn3|chrUn (25764450-25764301) | |
| 1-105, gnl|tetNig1|chr1_random (3110245-3110370) | |
| 1-105, gnl|xenTro1|scaffold_1238 (218077-217965) | |
| 174-278, gnl|bosTau2|chr7 (14998904-14998800) | |
| 174-278, gnl|canFam2|chr20 (58278369-58278297) | |
| 174-278, gnl|danRer3|chr8 (10184707-10184635) | |
| 174-278, gnl|echTel1|scaffold_58380 (656-584) | |
| 174-278, gnl|fr1|chrUn (199790052-199789976) | |
| 174-278, gnl|hg17|chr19 (4278120-4278192) | |
| 174-278, gnl|Hg17|chr19 (4278224-4278120) | |
| 174-278, gnl|mm7|chr17 (54159438-54159510) | |
| 174-278, gnl|Mm7|chr17 (54159542-54159438) | |
| 174-278, gnl|monDom2|scaffold_85 (1136461-1136533) | |
| 174-278, gnl|panTro1|chr20 (4562378-4562450) | |
| 174-278, gnl|rn3|chrUn (25765045-25764972) | |
| 174-278, gnl|tetNig1|chr1_random (3109629-3109692) | |
| 174-278, gnl|xenTro1|scaffold_702 (407832-407776) | |
| 358-506, gnl|bosTau2|chr7 (14997366-14997209) | |
| 358-506, gnl|canFam2|chr20 (58279839-58279503) | |
| 358-506, gnl|hg17|chr19 (4276231-4276567) | |
| 358-506, gnl|Hg17|chr19 (4276546-4276395) | |
| 358-506, gnl|loxAfr1|scaffold_130654 (518-155) | |
| 358-506, gnl|mm7|chr17 (54157076-54157428) | |
| 358-506, gnl|Mm7|chr17 (54157408-54157233) | |
| 358-506, gnl|monDom2|scaffold_85 (1134329-1134681) | |
| 358-506, gnl|rn3|chrUn (25766947-25766594) | |
| 674-827, gnl|bosTau2|chr7 (14996642-14996489) | |
| 674-827, gnl|Hg17|chr19 (4275197-4275051) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| jej (0.197844) | |
| ill (0.175593) | |
| ton (0.1755) | |
| cty (0.10408) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| jej (0.197844) | |
| ill (0.175593) | |
| ton (0.1755) | |
| cty (0.10408) |