Ss1.1-Pig3-SRG8013N15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGTGCCGTGCCGCGCGGGGGCTCCCTCGGTGATGTCGTGGATTCAAGCCGCAGCTCTGG TCCCAGGTCCTGGCGAGGAGGGGGACGTGTTTGACGAGGAAGCGGACGAGACGCTCCTGG TGCAGCGGGAATGGCGGAGCCACATGCAGAGACGAGTCAAAGAGGGTTATAGAGATGGGA TAGATGCTGGCAAAGCAGTAACTCTTCAGCAAGGCTTCAATCAAGGCTATAAGGAAGGTG CAGGAGTCATTATAAGTTATGGACAACTCAGAGGAACATTGAGCGCTTTGCTCTCCTGGT GTCACCTTCATGATAATAGTTCAGCTTTGATCAGTGAGATAAATAATCTTCTGGATGCAG TTGGCCAGTGTGAAGAGTATGTGCTCAGACGTCTGAAATCAGTCATTTCACAGCCCCGTG TTGTGGGTTTGTTGGACTCCATTCAGGACATGGACCTTGGTCATGTAGCTCCAGCTGAGG AAGAGCTTGACGAAGCCGAGGAGGAAAGATTCTGTGACGGTCACGCTGAGGTTAACGAAA GCTGTGGTAAGAACCTCAGTGGGGTAGCCTGTTCATCTTTAAAATGTTGCGGAACGCAGG AGCACTGCGCACAGCTCCTGGCGCAGGTTCCTGGCTCTCACCGCACGTTAGCTCTTGCTG CATTTTCTCCTGGGGTGTCAGTAGACGTGTTACAGCACCTCAAACAGCTGTAAAATTATC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGTGCCGTGCCGCGCGGGGGCTCCCTCGGTGATGTCGTGGATTCAAGCCGCAGCTCTGG TCCCAGGTCCTGGCGAGGAGGGGGACGTGTTTGACGAGGAAGCGGACGAGACGCTCCTGG TGCAGCGGGAATGGCGGAGCCACATGCAGAGACGAGTCAAAGAGGGTTATAGAGATGGGA TAGATGCTGGCAAAGCAGTAACTCTTCAGCAAGGCTTCAATCAAGGCTATAAGGAAGGTG CAGGAGTCATTATAAGTTATGGACAACTCAGAGGAACATTGAGCGCTTTGCTCTCCTGGT GTCACCTTCATGATAATAGTTCAGCTTTGATCAGTGAGATAAATAATCTTCTGGATGCAG TTGGCCAGTGTGAAGAGTATGTGCTCAGACGTCTGAAATCAGTCATTTCACAGCCCCGTG TTGTGGGTTTGTTGGACTCCATTCAGGACATGGACCTTGGTCATGTAGCTCCAGCTGAGG AAGAGCTTGACGAAGCCGAGGAGGAAAGATTCTGTGACGGTCACGCTGAGGTTAACGAAA GCTGTGGTAAGAACCTCAGTGGGGTAGCCTGTTCATCTTTAAAATGTTGCGGAACGCAGG AGCACTGCGCACAGCTCCTGGCGCAGGTTCCTGGCTCTCACCGCACGTTAGCTCTTGCTG CATTTTCTCCTGGGGTGTCAGTAGACGTGTTACAGCACCTCAAACAGCTGTAAAATTATC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 1-162, gnl|bosTau2|chr14 (23473916-23474077) | |
| 1-162, gnl|canFam2|chr18 (13125496-13125264) | |
| 1-162, gnl|echTel1|scaffold_269707 (877-1107) | |
| 1-162, gnl|hg17|chr7 (39379193-39379433) | |
| 1-162, gnl|Hg17|chr7 (39379226-39379387) | |
| 1-162, gnl|mm7|chr13 (17359580-17359360) | |
| 1-162, gnl|Mm7|chr13 (17359545-17359387) | |
| 1-162, gnl|monDom2|scaffold_76 (6193033-6193297) | |
| 1-162, gnl|panTro1|chr6 (45141181-45140941) | |
| 1-162, gnl|rheMac2|chr3 (86680984-86680744) | |
| 1-162, gnl|rn3|chr17 (54914682-54914909) | |
| 279-715, gnl|bosTau2|chr14 (23477492-23477928) | |
| 279-715, gnl|canFam2|chr18 (13121640-13121129) | |
| 279-715, gnl|dasNov1|scaffold_3338 (7490-7015) | |
| 279-715, gnl|galGal2|chr2 (48920716-48921214) | |
| 279-715, gnl|hg17|chr7 (39385090-39385588) | |
| 279-715, gnl|Hg17|chr7 (39385111-39385546) | |
| 279-715, gnl|mm7|chr13 (17356017-17355535) | |
| 279-715, gnl|Mm7|chr13 (17355994-17355586) | |
| 279-715, gnl|monDom2|scaffold_76 (6196079-6196567) | |
| 279-715, gnl|oryCun1|scaffold_213359 (11534-12045) | |
| 279-715, gnl|panTro1|chr6 (45135197-45134699) | |
| 279-715, gnl|rheMac2|chr3 (86675112-86674614) | |
| 279-715, gnl|rn3|chr17 (54918051-54918535) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-162, gnl|bosTau2|chr14 (23473916-23474077) | |
| 1-162, gnl|canFam2|chr18 (13125496-13125264) | |
| 1-162, gnl|echTel1|scaffold_269707 (877-1107) | |
| 1-162, gnl|hg17|chr7 (39379193-39379433) | |
| 1-162, gnl|Hg17|chr7 (39379226-39379387) | |
| 1-162, gnl|mm7|chr13 (17359580-17359360) | |
| 1-162, gnl|Mm7|chr13 (17359545-17359387) | |
| 1-162, gnl|monDom2|scaffold_76 (6193033-6193297) | |
| 1-162, gnl|panTro1|chr6 (45141181-45140941) | |
| 1-162, gnl|rheMac2|chr3 (86680984-86680744) | |
| 1-162, gnl|rn3|chr17 (54914682-54914909) | |
| 279-715, gnl|bosTau2|chr14 (23477492-23477928) | |
| 279-715, gnl|canFam2|chr18 (13121640-13121129) | |
| 279-715, gnl|dasNov1|scaffold_3338 (7490-7015) | |
| 279-715, gnl|galGal2|chr2 (48920716-48921214) | |
| 279-715, gnl|hg17|chr7 (39385090-39385588) | |
| 279-715, gnl|Hg17|chr7 (39385111-39385546) | |
| 279-715, gnl|mm7|chr13 (17356017-17355535) | |
| 279-715, gnl|Mm7|chr13 (17355994-17355586) | |
| 279-715, gnl|monDom2|scaffold_76 (6196079-6196567) | |
| 279-715, gnl|oryCun1|scaffold_213359 (11534-12045) | |
| 279-715, gnl|panTro1|chr6 (45135197-45134699) | |
| 279-715, gnl|rheMac2|chr3 (86675112-86674614) | |
| 279-715, gnl|rn3|chr17 (54918051-54918535) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| elu (0.385356) | |
| hlv (0.139256) | |
| eep (0.122564) |