Non-Coding RNA Search

Ss1.1-Pig3-SRG8014G14.5

Sequence:


               
               CAAGTGGCCGTTTCTGTCCCGGTTCCTGGTTCGGAGCGCGAAGCAGTGTTTGGCTCTCAT
GTTTCTCCGGATCCGTTGGGACAGAGGCAGGGCTCCGAGGGCAGGGATTCTGCTGGGCTA
GGTCTTGAACTCGTGCCACGGAGGGTTGGGACGGGCTCGGGAGGAAGCCGACACCTGATG
GCTCAGTCCACCATGCCCCCCAAATCTGACGTGTTGAGTCAAGATGAACTTCGCAAAAAG
CTGTACCAGACATTTAAGGATCATGGTATACTGGACACACTCAAGACAGAACTCAGAAAC
CACCTCATTCACGAGCTGATGCACCCTGCGTTGAGTGGCCCCCATCCACTGAAGCCCCCG
TCCATCGCAGTGGAAGGGAGCGTCCTCTTAATAGGCGCTTCCAACTCTCTAGTAGCAGAT
CACCTACGGAGATGTGGCTATGAGTATTCACTTTCTGTCTTCTTTCCGGAAAGTGGTTTG
GCTCAAGAGAAGGTATGTCTTTGCTTTTGTCTTTCTAAATTTTCTGTTAACAGCTTCATT
CTTCAGATAATAGCTAAGTGCTCCTTGGCTAGCTGGGTCCACTTCTCATGCATCTTTGAA
ATTATATCATGTATTTGTTATATAACATGATTTGGGAGTATGAAATTTGTTATTGTTACC
AGTTCCTTGGAATCTTTCTTTGTTTTTGTAAAATTGTGATGTGTAGGATCACTGCATGTT
TTGGAGCTAGCGTTGATCTCTGTGTAGTCTGAGACCCATAATGGCCATTCATTGAATGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAGTGGCCGTTTCTGTCCCGGTTCCTGGTTCGGAGCGCGAAGCAGTGTTTGGCTCTCAT
GTTTCTCCGGATCCGTTGGGACAGAGGCAGGGCTCCGAGGGCAGGGATTCTGCTGGGCTA
GGTCTTGAACTCGTGCCACGGAGGGTTGGGACGGGCTCGGGAGGAAGCCGACACCTGATG
GCTCAGTCCACCATGCCCCCCAAATCTGACGTGTTGAGTCAAGATGAACTTCGCAAAAAG
CTGTACCAGACATTTAAGGATCATGGTATACTGGACACACTCAAGACAGAACTCAGAAAC
CACCTCATTCACGAGCTGATGCACCCTGCGTTGAGTGGCCCCCATCCACTGAAGCCCCCG
TCCATCGCAGTGGAAGGGAGCGTCCTCTTAATAGGCGCTTCCAACTCTCTAGTAGCAGAT
CACCTACGGAGATGTGGCTATGAGTATTCACTTTCTGTCTTCTTTCCGGAAAGTGGTTTG
GCTCAAGAGAAGGTATGTCTTTGCTTTTGTCTTTCTAAATTTTCTGTTAACAGCTTCATT
CTTCAGATAATAGCTAAGTGCTCCTTGGCTAGCTGGGTCCACTTCTCATGCATCTTTGAA
ATTATATCATGTATTTGTTATATAACATGATTTGGGAGTATGAAATTTGTTATTGTTACC
AGTTCCTTGGAATCTTTCTTTGTTTTTGTAAAATTGTGATGTGTAGGATCACTGCATGTT
TTGGAGCTAGCGTTGATCTCTGTGTAGTCTGAGACCCATAATGGCCATTCATTGAATGTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               281-708, gnl|bosTau2|chrX (41853029-41853440)
               

               
               281-708, gnl|Hg17|chrX (13514238-13514704)
               

               
               281-708, gnl|Mm7|chrX (161209902-161209456)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               281-708, gnl|bosTau2|chrX (41853029-41853440)
               

               
               281-708, gnl|Hg17|chrX (13514238-13514704)
               

               
               281-708, gnl|Mm7|chrX (161209902-161209456)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               spl (0.143184)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               ebs (0.118301)

	281-708, gnl\|bosTau2\|chrX (41853029-41853440)
	281-708, gnl\|Hg17\|chrX (13514238-13514704)
	281-708, gnl\|Mm7\|chrX (161209902-161209456)