Non-Coding RNA Search

Ss1.1-Pig3-SRG8014P12.3

Sequence:


               
               TCGCATCTTGAGGGCCTGGTATTCATATGCTGGTTGTGGTTTAATAAAGCATCCTCGGAG
GAAGTTTTTTTAGATGGTCCTTGTCCATGTTAACATTGGCTTTCTAGCTATGCAGCTGGG
GCGCATAGGCCTTGTTGTCAGACAAGGGGAATTGAAATTCACAGACACCATATATCCCAA
AATGCTGTGTTAACACGTAAGGCCTCCTAGAGATCTACTTCAGGTTTGGCCAGGTTTCCT
TTACCACCTTGTTTTTCAGATAGGACTGAGGCTTTCAGTGCATACTGGCAACCTTGGAAG
GCAGGAATATGAAACTTTCCCATACTACTTAGCATCAGAATTGAATGGGAGACCCCATTC
TGCCATTTCTGGTGGCAGTGTGGCTCTGCCAGCTGGCCTTCTGCACGGTAATTCAGAGGC
AGCACCTTGGTTTGGTGGTTGTATGAATCAAAGGATACGGTCTGTGGGTCTCCTCCTAAA
ACCCCGTTTTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCGCATCTTGAGGGCCTGGTATTCATATGCTGGTTGTGGTTTAATAAAGCATCCTCGGAG
GAAGTTTTTTTAGATGGTCCTTGTCCATGTTAACATTGGCTTTCTAGCTATGCAGCTGGG
GCGCATAGGCCTTGTTGTCAGACAAGGGGAATTGAAATTCACAGACACCATATATCCCAA
AATGCTGTGTTAACACGTAAGGCCTCCTAGAGATCTACTTCAGGTTTGGCCAGGTTTCCT
TTACCACCTTGTTTTTCAGATAGGACTGAGGCTTTCAGTGCATACTGGCAACCTTGGAAG
GCAGGAATATGAAACTTTCCCATACTACTTAGCATCAGAATTGAATGGGAGACCCCATTC
TGCCATTTCTGGTGGCAGTGTGGCTCTGCCAGCTGGCCTTCTGCACGGTAATTCAGAGGC
AGCACCTTGGTTTGGTGGTTGTATGAATCAAAGGATACGGTCTGTGGGTCTCCTCCTAAA
ACCCCGTTTTGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-492, gnl|bosTau2|chr3 (67589296-67589782)
               

               
               3-492, gnl|Hg17|chr1 (46487044-46487824)
               

               
               3-492, gnl|Mm7|chr4 (115446958-115446501)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-492, gnl|bosTau2|chr3 (67589296-67589782)
               

               
               3-492, gnl|Hg17|chr1 (46487044-46487824)
               

               
               3-492, gnl|Mm7|chr4 (115446958-115446501)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               duo (0.172801)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               duo (0.172801)

	3-492, gnl\|bosTau2\|chr3 (67589296-67589782)
	3-492, gnl\|Hg17\|chr1 (46487044-46487824)
	3-492, gnl\|Mm7\|chr4 (115446958-115446501)