Non-Coding RNA Search

Ss1.1-Pig3-SRG8015B05.3

Sequence:


               
               CATCACCCGAACAAAATGCAGAGGAACCAGGAGCCGCCGAGAGGGGTGGGGGCATGCTGT
CCCCGCCATGCCATTCCATATGTGAGCTCGGAGCGCCCCTTGTCCTTCCCGTCGCCCGTC
CGAGAGGCTGGGAACCTGCTCGGGTCGCCATGAGCATGCGTCCGGGCTGTGGGCTCACAG
AGCCCCACTGCCCAGCTCAGAGGATGATCCTCCCAGGCGCCAAGTTGCTTGCAAATGGAG
TTGCGGAGAGTAGACGCTTCCAGACTCAGAAGCTTCTAGAACTGAACCAGGCTGCTGGGG
ACCTGTGTTTGACCCCCCACTCCCACCCCCGGTCCCCCGCTGCCTTTTCTTTGTGGAGGT
TCATAATCTGCTGCTGAAGCACAATATTTTGGTGCTTTCTTTTCTCATTTGTTAAAGACA
GTGTCCAAAGCCATTCCAGAAGCCAGGACCAGGGGCCTATTTCTGGGGAAGGTTGGTCAG
TCCCCACATTTTCCTTTCCTTCCCTTCTTATTTTTGTTTTTTACTTTTTGCCTGAGACAA
GCCAAGTGTGAGATGGTTTGACTTAAGAAAAATCAATGAAATTGTTTACTATTGTTTTAA
AATAAAACCTTGAACTCTGAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATCACCCGAACAAAATGCAGAGGAACCAGGAGCCGCCGAGAGGGGTGGGGGCATGCTGT
CCCCGCCATGCCATTCCATATGTGAGCTCGGAGCGCCCCTTGTCCTTCCCGTCGCCCGTC
CGAGAGGCTGGGAACCTGCTCGGGTCGCCATGAGCATGCGTCCGGGCTGTGGGCTCACAG
AGCCCCACTGCCCAGCTCAGAGGATGATCCTCCCAGGCGCCAAGTTGCTTGCAAATGGAG
TTGCGGAGAGTAGACGCTTCCAGACTCAGAAGCTTCTAGAACTGAACCAGGCTGCTGGGG
ACCTGTGTTTGACCCCCCACTCCCACCCCCGGTCCCCCGCTGCCTTTTCTTTGTGGAGGT
TCATAATCTGCTGCTGAAGCACAATATTTTGGTGCTTTCTTTTCTCATTTGTTAAAGACA
GTGTCCAAAGCCATTCCAGAAGCCAGGACCAGGGGCCTATTTCTGGGGAAGGTTGGTCAG
TCCCCACATTTTCCTTTCCTTCCCTTCTTATTTTTGTTTTTTACTTTTTGCCTGAGACAA
GCCAAGTGTGAGATGGTTTGACTTAAGAAAAATCAATGAAATTGTTTACTATTGTTTTAA
AATAAAACCTTGAACTCTGAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               62-619, gnl|bosTau2|chr11 (78876284-78876826)
               

               
               62-619, gnl|Hg17|chr9 (128931721-128932268)
               

               
               62-619, gnl|Mm7|chr2 (30407352-30407838)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               62-619, gnl|bosTau2|chr11 (78876284-78876826)
               

               
               62-619, gnl|Hg17|chr9 (128931721-128932268)
               

               
               62-619, gnl|Mm7|chr2 (30407352-30407838)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               che (0.136314)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)

	62-619, gnl\|bosTau2\|chr11 (78876284-78876826)
	62-619, gnl\|Hg17\|chr9 (128931721-128932268)
	62-619, gnl\|Mm7\|chr2 (30407352-30407838)