Non-Coding RNA Search

Ss1.1-Pig3-SRG8015J05.5

Sequence:


               
               GACAGCTTGCTCCATACTGAAACCATAGCATGTGTCCAGGTGCTCTGCACAGGCTGGGCA
CCGAGCCAATCCACCAACCAGGGTTTCTGCAAGGACCGATGGAGCAGTGTGAGCCGAAGC
TAGTTTTTAGCTGGTGTGGCCCCCAGGCAGGGTAGAATCAGGAAGAAGTGAAGCTGGGGA
AATGGCCTATAGTTCCTTGTAGCTCTTCCCTGGCACAGACTTGCTCTGCGCCCTCTTTTG
GGTGGTGCATTGGGCTTCTTACCAACTGAGGGCATCTCATCATGTTTTCCTCCACACTTG
TTAGCTGCCTACTCTCCTCTGCGGTGGGGCTGTGGAGGGTATAGTTGTATTTATTGTGTT
GTAATATTTTTAACATCCTGTGATTTCATGCTAGAAGTTTTCTATTGTTTATAGAAACTT
TTTGTAGAAACGGTAACTCGAAAGCACATCTGCATGTCAGTAAAAATCTCAAATTTCATA
CAGAAGGGGCCCCATCTGCCTTTTTCAAACCAGTGACATACTCCAGGGTCACAAATCCTC
ATAAGCATCCTGCTAAAGGCACTGGATAGGAAGAACTGTGACTGACGTACCTGCTCCATC
AAGCCCTCTTAAGTAGCACACCAGCTAGAAATGCTGTCTATTGCTGACCCGCAGAGCGGC
AGCCCTCAGGTTCTCTCTGTTGTCCTTGGTTGCCACTGGGCCTAACCCGGGGGTGGGGGT
GGGGGCACTGTCCAAAGGGAATTGCTGTTCTTGCGGTATCCAGGAAATAGGTTAAGTGAT
ATTTTACTGTGGTCTAGCTGTGTGCCCCAAAACCACCTCAATTTGGCATTTCTCAAGGGG
CTTTAGAGGGCCTTGGCCCTGACTTGCAGGAACATCTGAACCCAGTGTTCCTAAATGCTA
AATGTGCCAAATCTGCAGTGAGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACAGCTTGCTCCATACTGAAACCATAGCATGTGTCCAGGTGCTCTGCACAGGCTGGGCA
CCGAGCCAATCCACCAACCAGGGTTTCTGCAAGGACCGATGGAGCAGTGTGAGCCGAAGC
TAGTTTTTAGCTGGTGTGGCCCCCAGGCAGGGTAGAATCAGGAAGAAGTGAAGCTGGGGA
AATGGCCTATAGTTCCTTGTAGCTCTTCCCTGGCACAGACTTGCTCTGCGCCCTCTTTTG
GGTGGTGCATTGGGCTTCTTACCAACTGAGGGCATCTCATCATGTTTTCCTCCACACTTG
TTAGCTGCCTACTCTCCTCTGCGGTGGGGCTGTGGAGGGTATAGTTGTATTTATTGTGTT
GTAATATTTTTAACATCCTGTGATTTCATGCTAGAAGTTTTCTATTGTTTATAGAAACTT
TTTGTAGAAACGGTAACTCGAAAGCACATCTGCATGTCAGTAAAAATCTCAAATTTCATA
CAGAAGGGGCCCCATCTGCCTTTTTCAAACCAGTGACATACTCCAGGGTCACAAATCCTC
ATAAGCATCCTGCTAAAGGCACTGGATAGGAAGAACTGTGACTGACGTACCTGCTCCATC
AAGCCCTCTTAAGTAGCACACCAGCTAGAAATGCTGTCTATTGCTGACCCGCAGAGCGGC
AGCCCTCAGGTTCTCTCTGTTGTCCTTGGTTGCCACTGGGCCTAACCCGGGGGTGGGGGT
GGGGGCACTGTCCAAAGGGAATTGCTGTTCTTGCGGTATCCAGGAAATAGGTTAAGTGAT
ATTTTACTGTGGTCTAGCTGTGTGCCCCAAAACCACCTCAATTTGGCATTTCTCAAGGGG
CTTTAGAGGGCCTTGGCCCTGACTTGCAGGAACATCTGAACCCAGTGTTCCTAAATGCTA
AATGTGCCAAATCTGCAGTGAGGT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               32-713, gnl|bosTau2|chr23 (17337427-17336748)
               

               
               32-713, gnl|Hg17|chr6 (43598494-43597814)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               32-713, gnl|bosTau2|chr23 (17337427-17336748)
               

               
               32-713, gnl|Hg17|chr6 (43598494-43597814)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fbs (0.175346)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)

	32-713, gnl\|bosTau2\|chr23 (17337427-17336748)
	32-713, gnl\|Hg17\|chr6 (43598494-43597814)