Ss1.1-Pig3-SRG8015L14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCAGGGGATGCTCAGGCTCAGGTCCCTCCCCACCCCCAGAGAGCCCCTCACCCCCTGTG AACGTCACTGGCAGGCACCTCAAGGCCAACTCTGCGGTGGTGAGCTGGGACGTCCTGGAG GACGAGGTTGTCATCGGATTTGCCATCTCTCAGCAGAAGAAGGACGTGCGGATGCTGCGC TTCATCCAGGAGGTGAACACCACCACCCGCTCGTGCGCGCTCTGGGACCTGGAGGAGGAC ACTGAGTACATTGTGCACGTGCAGGCCATCTCCATTCAGGGCCAGAGCCCGGCCAGCGAG CCCGTGCTCTTCAAGACGCCTCGCGAGGCGGAGAAGATGGCCTCCAAGAACAAAGACGAG GTGACCATGAAGGAGATGGGGAGGAACCAACAGCTGCGGACGGGCGAGGTGCTGATCATT GTCGTGGTCCTGTTCATGTGGGCCGGTGTCATTGCCCTCTTCTGCCGCCAATATGATATC ATCAAGGACAATGAACCCAATAATAGCAAAGAAAAAACCAAGAGTGCGTCAGAAACCAGC ACACCGGAGCACCAAGGCGGGGGTCTTCTCCGCAGCAAGTTTCCAAACAAGCCCTCGGTG AACATCATTGAAGCATGACTGCTGGTCTGCACCCCAGCAGGGTTTCATTTTTCTTCTCTG CTGGTTGCCAGGTCCATGAGCACAGGGAGAGAGGGGACTGCCAGGGAGGGGGGCACAGCT AGCTGCACAGTTCTCCCTATGCCCCCTGCCCTCCCGCCCCATCCTAGTATGGTGAAGAAG GATGAACTACAAACCCAAATCCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCAGGGGATGCTCAGGCTCAGGTCCCTCCCCACCCCCAGAGAGCCCCTCACCCCCTGTG AACGTCACTGGCAGGCACCTCAAGGCCAACTCTGCGGTGGTGAGCTGGGACGTCCTGGAG GACGAGGTTGTCATCGGATTTGCCATCTCTCAGCAGAAGAAGGACGTGCGGATGCTGCGC TTCATCCAGGAGGTGAACACCACCACCCGCTCGTGCGCGCTCTGGGACCTGGAGGAGGAC ACTGAGTACATTGTGCACGTGCAGGCCATCTCCATTCAGGGCCAGAGCCCGGCCAGCGAG CCCGTGCTCTTCAAGACGCCTCGCGAGGCGGAGAAGATGGCCTCCAAGAACAAAGACGAG GTGACCATGAAGGAGATGGGGAGGAACCAACAGCTGCGGACGGGCGAGGTGCTGATCATT GTCGTGGTCCTGTTCATGTGGGCCGGTGTCATTGCCCTCTTCTGCCGCCAATATGATATC ATCAAGGACAATGAACCCAATAATAGCAAAGAAAAAACCAAGAGTGCGTCAGAAACCAGC ACACCGGAGCACCAAGGCGGGGGTCTTCTCCGCAGCAAGTTTCCAAACAAGCCCTCGGTG AACATCATTGAAGCATGACTGCTGGTCTGCACCCCAGCAGGGTTTCATTTTTCTTCTCTG CTGGTTGCCAGGTCCATGAGCACAGGGAGAGAGGGGACTGCCAGGGAGGGGGGCACAGCT AGCTGCACAGTTCTCCCTATGCCCCCTGCCCTCCCGCCCCATCCTAGTATGGTGAAGAAG GATGAACTACAAACCCAAATCCTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 147-355, gnl|bosTau2|chr2 (74134703-74134495) | |
| 147-355, gnl|canFam2|chr2 (71378768-71378543) | |
| 147-355, gnl|danRer3|chr13 (44276889-44277102) | |
| 147-355, gnl|dasNov1|scaffold_17053 (11102-11325) | |
| 147-355, gnl|echTel1|scaffold_324606 (435892-436185) | |
| 147-355, gnl|fr1|chrUn (406953-406736) | |
| 147-355, gnl|galGal2|chr23 (4704951-4705182) | |
| 147-355, gnl|hg17|chr1 (33002873-33003096) | |
| 147-355, gnl|Hg17|chr1 (33003089-33002884) | |
| 147-355, gnl|loxAfr1|scaffold_9802 (14502-14726) | |
| 147-355, gnl|mm7|chr4 (128584201-128583974) | |
| 147-355, gnl|Mm7|chr4 (128583980-128584188) | |
| 147-355, gnl|monDom2|scaffold_43 (6852690-6852460) | |
| 147-355, gnl|oryCun1|scaffold_202677 (48026-47808) | |
| 147-355, gnl|panTro1|chr1 (33746717-33746940) | |
| 147-355, gnl|rheMac2|chr1 (35654784-35655007) | |
| 147-355, gnl|rn3|chr5 (148310093-148309870) | |
| 147-355, gnl|tetNig1|chr10 (955137-954925) | |
| 147-355, gnl|xenTro1|scaffold_1432 (85630-85843) | |
| 442-579, gnl|bosTau2|chr2 (74131773-74131636) | |
| 442-579, gnl|canFam2|chr2 (71381405-71381266) | |
| 442-579, gnl|danRer3|chr13 (44268536-44268663) | |
| 442-579, gnl|dasNov1|scaffold_17053 (8585-8724) | |
| 442-579, gnl|echTel1|scaffold_320492 (145-5) | |
| 442-579, gnl|fr1|chrUn (409755-409616) | |
| 442-579, gnl|galGal2|chr23 (4701578-4701711) | |
| 442-579, gnl|hg17|chr1 (32999345-32999484) | |
| 442-579, gnl|Hg17|chr1 (32999494-32999358) | |
| 442-579, gnl|loxAfr1|scaffold_9802 (11945-12083) | |
| 442-579, gnl|mm7|chr4 (128586857-128586718) | |
| 442-579, gnl|Mm7|chr4 (128586706-128586842) | |
| 442-579, gnl|monDom2|scaffold_43 (6854720-6854584) | |
| 442-579, gnl|oryCun1|scaffold_108036 (14313-14452) | |
| 442-579, gnl|panTro1|chr1 (33743125-33743264) | |
| 442-579, gnl|rheMac2|chr1 (35651328-35651467) | |
| 442-579, gnl|rn3|chr5 (148312534-148312395) | |
| 442-579, gnl|tetNig1|chr10 (959478-959351) | |
| 442-579, gnl|xenTro1|scaffold_1432 (84580-84716) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 147-355, gnl|bosTau2|chr2 (74134703-74134495) | |
| 147-355, gnl|canFam2|chr2 (71378768-71378543) | |
| 147-355, gnl|danRer3|chr13 (44276889-44277102) | |
| 147-355, gnl|dasNov1|scaffold_17053 (11102-11325) | |
| 147-355, gnl|echTel1|scaffold_324606 (435892-436185) | |
| 147-355, gnl|fr1|chrUn (406953-406736) | |
| 147-355, gnl|galGal2|chr23 (4704951-4705182) | |
| 147-355, gnl|hg17|chr1 (33002873-33003096) | |
| 147-355, gnl|Hg17|chr1 (33003089-33002884) | |
| 147-355, gnl|loxAfr1|scaffold_9802 (14502-14726) | |
| 147-355, gnl|mm7|chr4 (128584201-128583974) | |
| 147-355, gnl|Mm7|chr4 (128583980-128584188) | |
| 147-355, gnl|monDom2|scaffold_43 (6852690-6852460) | |
| 147-355, gnl|oryCun1|scaffold_202677 (48026-47808) | |
| 147-355, gnl|panTro1|chr1 (33746717-33746940) | |
| 147-355, gnl|rheMac2|chr1 (35654784-35655007) | |
| 147-355, gnl|rn3|chr5 (148310093-148309870) | |
| 147-355, gnl|tetNig1|chr10 (955137-954925) | |
| 147-355, gnl|xenTro1|scaffold_1432 (85630-85843) | |
| 442-579, gnl|bosTau2|chr2 (74131773-74131636) | |
| 442-579, gnl|canFam2|chr2 (71381405-71381266) | |
| 442-579, gnl|danRer3|chr13 (44268536-44268663) | |
| 442-579, gnl|dasNov1|scaffold_17053 (8585-8724) | |
| 442-579, gnl|echTel1|scaffold_320492 (145-5) | |
| 442-579, gnl|fr1|chrUn (409755-409616) | |
| 442-579, gnl|galGal2|chr23 (4701578-4701711) | |
| 442-579, gnl|hg17|chr1 (32999345-32999484) | |
| 442-579, gnl|Hg17|chr1 (32999494-32999358) | |
| 442-579, gnl|loxAfr1|scaffold_9802 (11945-12083) | |
| 442-579, gnl|mm7|chr4 (128586857-128586718) | |
| 442-579, gnl|Mm7|chr4 (128586706-128586842) | |
| 442-579, gnl|monDom2|scaffold_43 (6854720-6854584) | |
| 442-579, gnl|oryCun1|scaffold_108036 (14313-14452) | |
| 442-579, gnl|panTro1|chr1 (33743125-33743264) | |
| 442-579, gnl|rheMac2|chr1 (35651328-35651467) | |
| 442-579, gnl|rn3|chr5 (148312534-148312395) | |
| 442-579, gnl|tetNig1|chr10 (959478-959351) | |
| 442-579, gnl|xenTro1|scaffold_1432 (84580-84716) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ese (0.126502) |