Non-Coding RNA Search

Ss1.1-Pig3-SRG8015M10.3

Sequence:


               
               GAATGATTCAGAAATGTCAGTGCTCTTGTCACTGTTGTCCTTGGATCACAAGTTGGTACT
CCTAAGCCTGACTGCAGTGTGTCAGTCATGGCAGGGGTATGCACTGCCCATACTGACTCA
TCGAGCCTTGTGGAAGGAGAGCCACAGGGGTTCCGAGTCTGCTTCTCCAAAATCAGGCTC
AATACACCATTCTCTATTGCTAGTAGATACAAACAGTACACAGGGAAATTAACTTACAAA
GCCAAATATCAATTTAAATTTTAATATTCTATGTGAACATGTTGGGAAATATGTCAGAGT
TTATCCCAAATTTTACTTTTATTTTAATATCTAAAATATTGGGTATGATTCAAATTGTAC
TCTATTTATCTGGAATATGACCTACTGGAGTATTCTGTTAATATTATATATATATTATAT
ATAAATATTCAAAATATTTTTTCAAAAGTAGAAGAATATTAACTCTTAAAAGTACAGCCA
GGTAGAATTTCCCATATTGAGGAACTTGGCTTTTTCAACAAGCCTTCAGAATCTGCTTTA
TGGAATCTAACATCCAGAAATATCCAGAACTCAGACAATTAAAGTGAATGTTTAAGTACT
ATGGGTATTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAATGATTCAGAAATGTCAGTGCTCTTGTCACTGTTGTCCTTGGATCACAAGTTGGTACT
CCTAAGCCTGACTGCAGTGTGTCAGTCATGGCAGGGGTATGCACTGCCCATACTGACTCA
TCGAGCCTTGTGGAAGGAGAGCCACAGGGGTTCCGAGTCTGCTTCTCCAAAATCAGGCTC
AATACACCATTCTCTATTGCTAGTAGATACAAACAGTACACAGGGAAATTAACTTACAAA
GCCAAATATCAATTTAAATTTTAATATTCTATGTGAACATGTTGGGAAATATGTCAGAGT
TTATCCCAAATTTTACTTTTATTTTAATATCTAAAATATTGGGTATGATTCAAATTGTAC
TCTATTTATCTGGAATATGACCTACTGGAGTATTCTGTTAATATTATATATATATTATAT
ATAAATATTCAAAATATTTTTTCAAAAGTAGAAGAATATTAACTCTTAAAAGTACAGCCA
GGTAGAATTTCCCATATTGAGGAACTTGGCTTTTTCAACAAGCCTTCAGAATCTGCTTTA
TGGAATCTAACATCCAGAAATATCCAGAACTCAGACAATTAAAGTGAATGTTTAAGTACT
ATGGGTATTAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-612, gnl|bosTau2|chr10 (9152838-9152222)
               

               
               1-612, gnl|Hg17|chr15 (63740624-63740020)
               

               
               1-612, gnl|Mm7|chr9 (64947334-64947889)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-612, gnl|bosTau2|chr10 (9152838-9152222)
               

               
               1-612, gnl|Hg17|chr15 (63740624-63740020)
               

               
               1-612, gnl|Mm7|chr9 (64947334-64947889)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nje (0.16592)
               

               
               lyg (0.133103)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nje (0.16592)
               

               
               lyg (0.133103)

	1-612, gnl\|bosTau2\|chr10 (9152838-9152222)
	1-612, gnl\|Hg17\|chr15 (63740624-63740020)
	1-612, gnl\|Mm7\|chr9 (64947334-64947889)