Ss1.1-Pig3-SRG8015N08.3
|
TGCTGGAGGGGGGATTCAGGCACCCAGCTCGGGCAACAGGACCTGCGATTCTTTCCAAGT
CCAGGCTTTGTCCACTCTATAAGTAGAAGAGCTTTAATGATTTGCCTGGTCTGGGATGGC
AGGTATACAGCGTGTGTCCTTCCCGTTTCTATGACTACCACTCTAAGCCCAGCAGTGTAT
TCCCCCCCCCCCCAACACACACACACACCAAGCTGAACGTGGCTTCATACCTTATGGAAG
CACTAGCCAATTGGCAAGAGCTGCATTGTCGGCATAGATGAGTAATCAAGCATCCCTGCC
CAGGATCACACATCTTGATGGGGGTGGAGCCTTGACTAGACTAGAAAACACCATCTCTCT
TTCCCAACTCACTTTGCTTTCCTGCATCTTTGCTGGAGCAAGCTTAGCCTCTCCACCCTG
AACCACCCCACACCCCTGATTCTTTGTCTTCAGTGGGTAACAGTGGGGGACGCCATCGTG
CTGAGGAAAAGCGAGCCCAGCCAGCTTTCTCAGCATCTTCCAGACCTTGAGCCCTTTGCC
TCAGTGAGAGGAAAGCCATTCTGTTACGTAAACTTAATATCCATCCGCCTGGACCCCCAA
GCCCCCACCATCCAGTTTGACGGAAGGATATACTTTGTTATAACTTATTATTTTTTTCTT
TGTAAATACAAGATGTTTATAGGAAATGTGTATTCTGAATTCTACAGGCGGAATGAGTCA
CTACACCAAAATAGTTCTATTATTTAGAATATGTTAATTTTAAAGGGACCTGATAGGTAT
TTATTTACGTATGCGATCCACATTTGTGTAAAATTATTTGATCCTACTAACCAAGCTTCC
TGGAAAGTTGCTGCACACGATGTCTTATTTTATGTCCATAATTACAATTTAGTATCCTGA
CTAGCCAAATTCCTTGGGTTTTAAGATTGAATATAAATTACTCTGCTTTTCGACTCATCG
GGGGGCTTTCACCCCTGGCATTGCACCTGAAACAGGTCTGTCTGGATTGCCACCATTCCA
CCTTAAATATTATATTTGCTCATATAATCTGCCCTCTCCCTGGCCCCAACATTTGGAGAA
GGAAGGGTCTCTTTTGCCCCTTCTCTTTGTATCGCTTCGTTCGTTAGAATCACCAGCAGT
AACTCGCCAGGGAGGTTTGCTTAGAGCTGTGAAGGAGCCGGGGTCCCCTGGCAGGGGCAG
AGAGGGACTATGGGATGTAGCCCGTTCACTGCTCTGACCACGCCTCCTGGGTCCCCACAG
ACTGACCGACTGCTGGCTGGGGGCGCTGGGTGGTCAACTGCACAGCCGCAAGCAAGGAAC
CCACAGAATATGCCATCTACCCCAGGTCACCTTTGTGCTGTCACTGAGTGCTTAAGGAGG
TGGCGGGTAGAAGGCGAATTATATGAGTAAATACAGTGTTTTCAGCAAAAATGACAACTA
TTTTTGTGTACGACTAATTTATTTTTATTATTGTAAAAATACAATAAACGGGTTTTAAAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGCTGGAGGGGGGATTCAGGCACCCAGCTCGGGCAACAGGACCTGCGATTCTTTCCAAGT
CCAGGCTTTGTCCACTCTATAAGTAGAAGAGCTTTAATGATTTGCCTGGTCTGGGATGGC
AGGTATACAGCGTGTGTCCTTCCCGTTTCTATGACTACCACTCTAAGCCCAGCAGTGTAT
TCCCCCCCCCCCCAACACACACACACACCAAGCTGAACGTGGCTTCATACCTTATGGAAG
CACTAGCCAATTGGCAAGAGCTGCATTGTCGGCATAGATGAGTAATCAAGCATCCCTGCC
CAGGATCACACATCTTGATGGGGGTGGAGCCTTGACTAGACTAGAAAACACCATCTCTCT
TTCCCAACTCACTTTGCTTTCCTGCATCTTTGCTGGAGCAAGCTTAGCCTCTCCACCCTG
AACCACCCCACACCCCTGATTCTTTGTCTTCAGTGGGTAACAGTGGGGGACGCCATCGTG
CTGAGGAAAAGCGAGCCCAGCCAGCTTTCTCAGCATCTTCCAGACCTTGAGCCCTTTGCC
TCAGTGAGAGGAAAGCCATTCTGTTACGTAAACTTAATATCCATCCGCCTGGACCCCCAA
GCCCCCACCATCCAGTTTGACGGAAGGATATACTTTGTTATAACTTATTATTTTTTTCTT
TGTAAATACAAGATGTTTATAGGAAATGTGTATTCTGAATTCTACAGGCGGAATGAGTCA
CTACACCAAAATAGTTCTATTATTTAGAATATGTTAATTTTAAAGGGACCTGATAGGTAT
TTATTTACGTATGCGATCCACATTTGTGTAAAATTATTTGATCCTACTAACCAAGCTTCC
TGGAAAGTTGCTGCACACGATGTCTTATTTTATGTCCATAATTACAATTTAGTATCCTGA
CTAGCCAAATTCCTTGGGTTTTAAGATTGAATATAAATTACTCTGCTTTTCGACTCATCG
GGGGGCTTTCACCCCTGGCATTGCACCTGAAACAGGTCTGTCTGGATTGCCACCATTCCA
CCTTAAATATTATATTTGCTCATATAATCTGCCCTCTCCCTGGCCCCAACATTTGGAGAA
GGAAGGGTCTCTTTTGCCCCTTCTCTTTGTATCGCTTCGTTCGTTAGAATCACCAGCAGT
AACTCGCCAGGGAGGTTTGCTTAGAGCTGTGAAGGAGCCGGGGTCCCCTGGCAGGGGCAG
AGAGGGACTATGGGATGTAGCCCGTTCACTGCTCTGACCACGCCTCCTGGGTCCCCACAG
ACTGACCGACTGCTGGCTGGGGGCGCTGGGTGGTCAACTGCACAGCCGCAAGCAAGGAAC
CCACAGAATATGCCATCTACCCCAGGTCACCTTTGTGCTGTCACTGAGTGCTTAAGGAGG
TGGCGGGTAGAAGGCGAATTATATGAGTAAATACAGTGTTTTCAGCAAAAATGACAACTA
TTTTTGTGTACGACTAATTTATTTTTATTATTGTAAAAATACAATAAACGGGTTTTAAAA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
|
5-187, gnl|bosTau2|chr10 (11646707-11646891) |
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5-187, gnl|canFam2|chr30 (38355311-38355859) |
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5-187, gnl|dasNov1|scaffold_77690 (7507-8032) |
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5-187, gnl|hg17|chr15 (69860791-69861377) |
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5-187, gnl|Hg17|chr15 (69861181-69861370) |
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5-187, gnl|loxAfr1|scaffold_95005 (765-1398) |
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5-187, gnl|mm7|chr9 (59995574-59995110) |
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5-187, gnl|panTro1|chr16 (70492156-70492740) |
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5-187, gnl|rheMac2|chr7 (50430475-50431038) |
| |
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356-1500, gnl|bosTau2|chr10 (11647289-11648454) |
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356-1500, gnl|Hg17|chr15 (69861536-69862667) |
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356-1500, gnl|Mm7|chr9 (59994862-59993866) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
5-187, gnl|bosTau2|chr10 (11646707-11646891) |
|
5-187, gnl|canFam2|chr30 (38355311-38355859) |
|
5-187, gnl|dasNov1|scaffold_77690 (7507-8032) |
|
5-187, gnl|hg17|chr15 (69860791-69861377) |
|
5-187, gnl|Hg17|chr15 (69861181-69861370) |
|
5-187, gnl|loxAfr1|scaffold_95005 (765-1398) |
|
5-187, gnl|mm7|chr9 (59995574-59995110) |
|
5-187, gnl|panTro1|chr16 (70492156-70492740) |
|
5-187, gnl|rheMac2|chr7 (50430475-50431038) |
| |
|
356-1500, gnl|bosTau2|chr10 (11647289-11648454) |
|
356-1500, gnl|Hg17|chr15 (69861536-69862667) |
|
356-1500, gnl|Mm7|chr9 (59994862-59993866) |
|
col (0.195008) |
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fbs (0.175346) |
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cty (0.10408) |
|
col (0.195008) |
|
fbs (0.175346) |
|
cty (0.10408) |
