Non-Coding RNA Search

Ss1.1-Pig3-SRG8015N09.5

Sequence:


               
               TTTGAGAGGAGCTTAGCTGAGTAATTCAGGCTCAGGGGCTCATGAGGTTGCAATCCATTC
TGTCAGCCAGGGCTGCAGTCATCGTCCATGAGTATGCGGGTTCGATCCGGCATTGCTGTG
AGCAGTAGGTCACAGACGAGGCTTGGATCCTGCGTTGCTATGGCTGTGGTATCGGCTGGC
AGCTATAGCTCATATTCAACCGCTAGCTTGGGAATTTCCATATGTCACAGGTACAGCCCT
AAAAAGCAAAAGTAAGGAAATAAATAACAACAACAAAACCAAGAGGAAGATACAGTTGTT
CTTCTTTTATCTGATTCCACCAGGACCAGACCAAACTAGCATTCTGCTTATTCTTACCTA
TTTTAATCCATGTTGTTTTCTGGTGAATTCCTTACAGAGGAAATAAGAGTCGCTGTAGGA
CAGCATAACAATATCCTTCTGTTCCTAAGTCTCTTGTAAGAAATCTGTCCAGTCGATTGC
TCAGGTGTCCTGCTGGCAATGGTGGTGAGCTGTCCAGTGAGACCTGTGTTTGGTCGTGTG
TGCATTAGGGTGCAGAAGCTAACGACGTACCAAGAATACAAAGAGGCTGCAGCCACTTAC
CAGGAGGCCTGGCGCGCACTCCGGAAGCAGGCATTTGGATCCTGGATCAGAAACCCACCA
GATTATCACCAGTTTAAATGAGAAAAGCTTGCTGGCAGCAGGTGTTCTCCGTTCCTTCAT
GCTGGACCACCTTCTTCCTACACGCTGAACAAGCCTTAGCTTCCCCTGCAACTGATAAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTGAGAGGAGCTTAGCTGAGTAATTCAGGCTCAGGGGCTCATGAGGTTGCAATCCATTC
TGTCAGCCAGGGCTGCAGTCATCGTCCATGAGTATGCGGGTTCGATCCGGCATTGCTGTG
AGCAGTAGGTCACAGACGAGGCTTGGATCCTGCGTTGCTATGGCTGTGGTATCGGCTGGC
AGCTATAGCTCATATTCAACCGCTAGCTTGGGAATTTCCATATGTCACAGGTACAGCCCT
AAAAAGCAAAAGTAAGGAAATAAATAACAACAACAAAACCAAGAGGAAGATACAGTTGTT
CTTCTTTTATCTGATTCCACCAGGACCAGACCAAACTAGCATTCTGCTTATTCTTACCTA
TTTTAATCCATGTTGTTTTCTGGTGAATTCCTTACAGAGGAAATAAGAGTCGCTGTAGGA
CAGCATAACAATATCCTTCTGTTCCTAAGTCTCTTGTAAGAAATCTGTCCAGTCGATTGC
TCAGGTGTCCTGCTGGCAATGGTGGTGAGCTGTCCAGTGAGACCTGTGTTTGGTCGTGTG
TGCATTAGGGTGCAGAAGCTAACGACGTACCAAGAATACAAAGAGGCTGCAGCCACTTAC
CAGGAGGCCTGGCGCGCACTCCGGAAGCAGGCATTTGGATCCTGGATCAGAAACCCACCA
GATTATCACCAGTTTAAATGAGAAAAGCTTGCTGGCAGCAGGTGTTCTCCGTTCCTTCAT
GCTGGACCACCTTCTTCCTACACGCTGAACAAGCCTTAGCTTCCCCTGCAACTGATAAGG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               276-780, gnl|bosTau2|chr18 (1673724-1674231)
               

               
               276-780, gnl|Hg17|chr16 (74192445-74191521)
               

               
               276-780, gnl|Mm7|chr8 (110568786-110568362)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               276-780, gnl|bosTau2|chr18 (1673724-1674231)
               

               
               276-780, gnl|Hg17|chr16 (74192445-74191521)
               

               
               276-780, gnl|Mm7|chr8 (110568786-110568362)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pro (0.512033)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pro (0.512033)

	276-780, gnl\|bosTau2\|chr18 (1673724-1674231)
	276-780, gnl\|Hg17\|chr16 (74192445-74191521)
	276-780, gnl\|Mm7\|chr8 (110568786-110568362)