Non-Coding RNA Search

Ss1.1-Pig3-SRG8015P04.5

Sequence:


               
               GGAGACGCGCTTGGAGGCTTCTCAGTGGGGGCGAGTAATATGCCTTGGATGTGAGGAACA
GGCCCAGATCATTTCTGCTGTGTTTTGAGATGTGCATCTGTTTCTTCTAAGTTGATTAAA
ATTGTTTTAGAACTGTTAAGTACCTCAAAGAGTAAGTACATCTTTGATTATATCTTATAC
TTCCTTTGCTTTTGTATATCAGATGACACTTTTTTCTCTTGTTTAGAAAAATAGGGGACA
GACCTCTCTTGTGAGAGCAATGACGATGACCTACAGTTTCTAATAAAAGCCAAATTACAG
GTAGAAGGGAAGGGCTGCTAGTGTTACTCCCAAGAATTAATGTAGATGCTGTGACTCATA
CAGCTAGTCCTTGGAATTGTTCCTGAAAAAATACAGTAATGAGTCTAGGAGTTCCTAAAG
CTCTTAGCCACTAATCTTGCTCCAGATTCCTTTGACCTCTATTCAAAACCACAGAAAAGG
TATCCTTTTGAAAATATTTTTACTGAAAATATCTTTGATAACCTTCAGTTGTGTCCCAAG
TTTTATCCATCAACTCTGCAAGTCATTGAGGAATATATAGTTAAATGACATATGTGAAAC
TGTGTGTTGAATAGAGTTCTGGTCTGATTTGGTCAGTAACTACTCTCAGAATACTTTCAA
ATAAGCCTACCAACAATGGTCATAAACTTAAATATCTGACCATATTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGACGCGCTTGGAGGCTTCTCAGTGGGGGCGAGTAATATGCCTTGGATGTGAGGAACA
GGCCCAGATCATTTCTGCTGTGTTTTGAGATGTGCATCTGTTTCTTCTAAGTTGATTAAA
ATTGTTTTAGAACTGTTAAGTACCTCAAAGAGTAAGTACATCTTTGATTATATCTTATAC
TTCCTTTGCTTTTGTATATCAGATGACACTTTTTTCTCTTGTTTAGAAAAATAGGGGACA
GACCTCTCTTGTGAGAGCAATGACGATGACCTACAGTTTCTAATAAAAGCCAAATTACAG
GTAGAAGGGAAGGGCTGCTAGTGTTACTCCCAAGAATTAATGTAGATGCTGTGACTCATA
CAGCTAGTCCTTGGAATTGTTCCTGAAAAAATACAGTAATGAGTCTAGGAGTTCCTAAAG
CTCTTAGCCACTAATCTTGCTCCAGATTCCTTTGACCTCTATTCAAAACCACAGAAAAGG
TATCCTTTTGAAAATATTTTTACTGAAAATATCTTTGATAACCTTCAGTTGTGTCCCAAG
TTTTATCCATCAACTCTGCAAGTCATTGAGGAATATATAGTTAAATGACATATGTGAAAC
TGTGTGTTGAATAGAGTTCTGGTCTGATTTGGTCAGTAACTACTCTCAGAATACTTTCAA
ATAAGCCTACCAACAATGGTCATAAACTTAAATATCTGACCATATTCT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-170, gnl|bosTau2|chr28 (5756970-5756801)
               

               
               1-170, gnl|Hg17|chr7 (89677454-89679572)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-170, gnl|bosTau2|chr28 (5756970-5756801)
               

               
               1-170, gnl|Hg17|chr7 (89677454-89679572)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.358938)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.358938)

	1-170, gnl\|bosTau2\|chr28 (5756970-5756801)
	1-170, gnl\|Hg17\|chr7 (89677454-89679572)