Ss1.1-Pig3-SRG8016C02.5
|
CTCGGGGGAGGCCAGATGTATAGCCCTCGGGAAATGAGGGCAAACGGTGGCTGGCAGGAG
GCTGTGACTCCGTCCTCAGTGACGTCTCCGACAGAGGGACCAGGGAGCGTTCATTCTGAC
ACTTCCAACTGATCTCGCCCCTGAGGGCCACAGGGGTGGGGGCTCCCAAGGCAACTCTTG
AAGAGGACGCAGGCATCCAGAGGACAAACCCAGACACAGGAGAAGCACAAGCTAGAGACG
GGCCAACAGGAGCATCCCTTCCCTGGCCAGACTCTCTCAGTGCTGGGGTGCTGACTCTGT
GGCAAGGAAGACGGGGTCCCCTGAGAGGAGAGTGGGGTCTATTTCCCCCTTTTTCCTTCA
TTTTTTCTCCACCTTTCTTGCTCACACACAAATACACACACCTAGAATCCTAGTTTTCAG
AACTTTCTCCCCTCTCTCTCTCATGCATTCTGTTTCTCTCTCCTACCC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTCGGGGGAGGCCAGATGTATAGCCCTCGGGAAATGAGGGCAAACGGTGGCTGGCAGGAG
GCTGTGACTCCGTCCTCAGTGACGTCTCCGACAGAGGGACCAGGGAGCGTTCATTCTGAC
ACTTCCAACTGATCTCGCCCCTGAGGGCCACAGGGGTGGGGGCTCCCAAGGCAACTCTTG
AAGAGGACGCAGGCATCCAGAGGACAAACCCAGACACAGGAGAAGCACAAGCTAGAGACG
GGCCAACAGGAGCATCCCTTCCCTGGCCAGACTCTCTCAGTGCTGGGGTGCTGACTCTGT
GGCAAGGAAGACGGGGTCCCCTGAGAGGAGAGTGGGGTCTATTTCCCCCTTTTTCCTTCA
TTTTTTCTCCACCTTTCTTGCTCACACACAAATACACACACCTAGAATCCTAGTTTTCAG
AACTTTCTCCCCTCTCTCTCTCATGCATTCTGTTTCTCTCTCCTACCC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
235-433, BP154490 full-length enriched swine cDNA library, adult ovary Sus
(dbj|BP154490.1|), blast E-value=0, identity=99.5% |
PigEST conread start position and end position of sequence similarity to another annotated EST (NCBI dbEST),
transcript identifier and annotation,
blast E-value,
PigEST conread identity to the similar transcript
|
235-433, BP154490 full-length enriched swine cDNA library, adult ovary Sus
(dbj|BP154490.1|), blast E-value=0, identity=99.5% |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
ese (0.126502) |
|
med (0.116252) |
|
cty (0.10408) |
|
jej (0.0989218) |
|
ese (0.126502) |
|
med (0.116252) |
|
cty (0.10408) |
|
jej (0.0989218) |
