Non-Coding RNA Search

Ss1.1-Pig3-SRG8016C22.3

Sequence:


               
               GTTTAGGAAGTCTCTTCAGAAATCAGAAGTTACTTCATTAACCGTGGTATAAATCTACTC
AAATATTTTACTTGGAGGCAAGAATTGTCTAATTTCAGTTGTGCAAGACATGTGCCTTAC
AATTATTTTGAATTTAAAATTTAACAGATTTTGTAATGACTTTGTTAATAGCTGTATAAA
CAATAATATACTCAATCTAGAACAAAACCAGTGGCATACACAATATAAATCAGATGTCTT
TACGTGTTGCCTATATGACCACAAGTAGCCGAGGGTTCTGGAATTGATTTGGTCCCTCCC
TTGCCCACAAAACAAAGATGATCGTTTGGAGTCTGGGACTGGTCCTGAAGGCAGATATCT
GCAAAGTTTGCCTCAGGTCTTTCCTAGCTCTGTTGAGCCTCTATCAGCATATAGGAGGGT
TTTACAGTTGGGACTAGTTGAGTGGTCACTACTGGCATGGAGTTAAGCACAGCGTACTGA
CTTTTCAGCAAGGAAAGAAACTGAATTCGTGTGAAGATGGGTTGGAGGGCATCAGTGATC
ATGTGTTCGTTGTCCAGGGTTTGGCTAGGAGAGGAAATGGAGGCACATCTGTCCTATCTT
CTAGTTTCTACAATGCTTGTGGCTCCTTCTTCTCAAGAGAGAGTTGTAACTGAGTCTGGT
CTTCAAATGCCTCTGTTCTCCTTTTAACCAAATAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTAGGAAGTCTCTTCAGAAATCAGAAGTTACTTCATTAACCGTGGTATAAATCTACTC
AAATATTTTACTTGGAGGCAAGAATTGTCTAATTTCAGTTGTGCAAGACATGTGCCTTAC
AATTATTTTGAATTTAAAATTTAACAGATTTTGTAATGACTTTGTTAATAGCTGTATAAA
CAATAATATACTCAATCTAGAACAAAACCAGTGGCATACACAATATAAATCAGATGTCTT
TACGTGTTGCCTATATGACCACAAGTAGCCGAGGGTTCTGGAATTGATTTGGTCCCTCCC
TTGCCCACAAAACAAAGATGATCGTTTGGAGTCTGGGACTGGTCCTGAAGGCAGATATCT
GCAAAGTTTGCCTCAGGTCTTTCCTAGCTCTGTTGAGCCTCTATCAGCATATAGGAGGGT
TTTACAGTTGGGACTAGTTGAGTGGTCACTACTGGCATGGAGTTAAGCACAGCGTACTGA
CTTTTCAGCAAGGAAAGAAACTGAATTCGTGTGAAGATGGGTTGGAGGGCATCAGTGATC
ATGTGTTCGTTGTCCAGGGTTTGGCTAGGAGAGGAAATGGAGGCACATCTGTCCTATCTT
CTAGTTTCTACAATGCTTGTGGCTCCTTCTTCTCAAGAGAGAGTTGTAACTGAGTCTGGT
CTTCAAATGCCTCTGTTCTCCTTTTAACCAAATAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-696, gnl|bosTau2|chr1 (9606311-9605634)
               

               
               1-696, gnl|Hg17|chr21 (18560828-18561538)
               

               
               1-696, gnl|Mm7|chr16 (78948167-78948852)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-696, gnl|bosTau2|chr1 (9606311-9605634)
               

               
               1-696, gnl|Hg17|chr21 (18560828-18561538)
               

               
               1-696, gnl|Mm7|chr16 (78948167-78948852)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               mcp (0.170648)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.170648)

	1-696, gnl\|bosTau2\|chr1 (9606311-9605634)
	1-696, gnl\|Hg17\|chr21 (18560828-18561538)
	1-696, gnl\|Mm7\|chr16 (78948167-78948852)