Non-Coding RNA Search

Ss1.1-Pig3-SRG8016F05.5

Sequence:


               
               CCAAAAAAAAAAAAAAGCAAAAAGGAATAATTTTTTCCAGAAGAAAAATTTCTGAACTAA
AGTATCAGAAATGAGGGTTACGAGTCTTACCTCCCAAACTGCCCTTTGCTTATTTAGCAT
GTCCAGTAATTGGCCACAAAGTAAACAACCAAAAATGGCTTCCATTATTATTTCCTTTGG
ATTGTGTAACAGACACAGTGGCAGTCCCCTGTACTATTTCATTTTTTTCCCAGCAACCTA
CGATCTAACCTAATGATCAGAAACCCTGTCACTAGTCAACCAGTAATCAGATTTCTGACC
CTTGAGCGCCATCTGCTGGCTAATTGCCCGCTCCTGGAGCTACTTATCCTGTGCTGTATT
TTGTAGCTCACGCTGCCCCTGGAACCATGCATCTGCTTCTGCAGTTCTCTTGCCCACCAT
CCCTAGGGACAAACAGCTCTCTTGACAGGGTCAGAATGGGTGGCTATCAACTAAAATTTC
ATACCAGTTACAAGAATTTCTCCCACCTGTAATGGTTATCCAGTTATTTATGTACAAAGA
AACAATTACATAATACTTTCAAGAAAGGACGTTATTTTTCCATTTCTTTAAAGAGGAACA
CTTAAAGCGAATCTGACATGAGGGTCTTTGTTTCAAGAGGTTTCATTTTTTTTTTAAAGA
AAGCCTTCTGAAATATAAATGTTCTGACGTAATATATATAATTTTACTTCAATGATTTTA
AAGATGACTTCTCTAAGTGGAGACCTTAATAGGACTCTACATGTACTCATGTTTATGGGG
TTAAATTATAGATAATGAAATATTTAATATGGGGTTAAATTATAGATAATGAAATATTTA
ATATGGGGTTAAATTACAGATAATGAAATATTTAATGTATAATTCTGTGGGGTTATTAAA
GCATTTTTTTGCCTTTTCAGCAAACCATTCCTCAAGCTACTGCAGCAAAATATCCCCGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCAAAAAAAAAAAAAAGCAAAAAGGAATAATTTTTTCCAGAAGAAAAATTTCTGAACTAA
AGTATCAGAAATGAGGGTTACGAGTCTTACCTCCCAAACTGCCCTTTGCTTATTTAGCAT
GTCCAGTAATTGGCCACAAAGTAAACAACCAAAAATGGCTTCCATTATTATTTCCTTTGG
ATTGTGTAACAGACACAGTGGCAGTCCCCTGTACTATTTCATTTTTTTCCCAGCAACCTA
CGATCTAACCTAATGATCAGAAACCCTGTCACTAGTCAACCAGTAATCAGATTTCTGACC
CTTGAGCGCCATCTGCTGGCTAATTGCCCGCTCCTGGAGCTACTTATCCTGTGCTGTATT
TTGTAGCTCACGCTGCCCCTGGAACCATGCATCTGCTTCTGCAGTTCTCTTGCCCACCAT
CCCTAGGGACAAACAGCTCTCTTGACAGGGTCAGAATGGGTGGCTATCAACTAAAATTTC
ATACCAGTTACAAGAATTTCTCCCACCTGTAATGGTTATCCAGTTATTTATGTACAAAGA
AACAATTACATAATACTTTCAAGAAAGGACGTTATTTTTCCATTTCTTTAAAGAGGAACA
CTTAAAGCGAATCTGACATGAGGGTCTTTGTTTCAAGAGGTTTCATTTTTTTTTTAAAGA
AAGCCTTCTGAAATATAAATGTTCTGACGTAATATATATAATTTTACTTCAATGATTTTA
AAGATGACTTCTCTAAGTGGAGACCTTAATAGGACTCTACATGTACTCATGTTTATGGGG
TTAAATTATAGATAATGAAATATTTAATATGGGGTTAAATTATAGATAATGAAATATTTA
ATATGGGGTTAAATTACAGATAATGAAATATTTAATGTATAATTCTGTGGGGTTATTAAA
GCATTTTTTTGCCTTTTCAGCAAACCATTCCTCAAGCTACTGCAGCAAAATATCCCCGGA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               339-802, gnl|bosTau2|chr10 (1523728-1524212)
               

               
               339-802, gnl|Hg17|chr5 (75007415-75006225)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               339-802, gnl|bosTau2|chr10 (1523728-1524212)
               

               
               339-802, gnl|Hg17|chr5 (75007415-75006225)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	339-802, gnl\|bosTau2\|chr10 (1523728-1524212)
	339-802, gnl\|Hg17\|chr5 (75007415-75006225)